RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 KLK6Q92876 244 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 RAB8BQ92930 207 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 RHNO1Q9BSD3 238 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 PINK1Q9BXM7 581 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 MMP27Q9H306 513 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CACYBPQ9HB71 228 aaKnown RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 PRDM7Q9NQW5 492 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 MS4A12Q9NXJ0 267 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 C5AR2Q9P296 337 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ANKMY1Q9P2S6 941 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 OSGIN1Q9UJX0 560 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 PNMA8BQ9ULN7 279 aaPredicted RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 ASB4Q9Y574 426 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ZNF780BQ9Y6R6 833 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CCDC88CQ9P219 2028 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 TRBV4-1A0A0J9YWV2 114 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 GSAPA4D1B5 854 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 URADA6NGE7 173 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ISM1B1AKI9 464 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 FFAR1O14842 300 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ZW10O43264 779 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 FUCA1P04066 466 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ADORA3P0DMS8 318 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 POU2F1P14859 743 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 XKP51811 444 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ST3GAL4Q11206 333 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 HYAL2Q12891 473 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 NFATC4Q14934 902 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CEBPEQ15744 281 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ATAD3BQ5T9A4 648 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 AMIGO1Q86WK6 493 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 NRROSQ86YC3 692 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 ST13P5Q8NFI4 369 aaPredicted RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 OR6Q1Q8NGQ2 317 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 NT5CQ8TCD5 201 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 XAGE5Q8WWM1 108 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 LCN9Q8WX39 176 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 FGF14Q92915 247 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 PRRC1Q96M27 445 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 WDR92Q96MX6 357 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 FNDC11Q9BVV2 318 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 PRRG3Q9BZD7 231 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 SERHL2Q9H4I8 314 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 GPR83Q9NYM4 423 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CCDC59Q9P031 241 aaKnown RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 PHF11Q9UIL8 331 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP54-202ENST00000502850 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
NUP54-202ENST00000502850 KLK4Q9Y5K2 254 aa11.31□□□□□ -0.6
NUP54-202ENST00000502850 IRGMA1A4Y4 181 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 OR52A4PA6NMU1 304 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 AXIN1O15169 862 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 MBTPS2O43462 519 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 B4GALT2O60909 372 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 NME6O75414 186 aaPredicted RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 SULT1C4O75897 302 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 APBB3O95704 486 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 AIFM1O95831 613 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 CHRM5P08912 532 aaPredicted RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 ALOX5P09917 674 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 NR2F6P10588 404 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 F3P13726 295 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 CNR2P34972 360 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 SLC19A1P41440 591 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 RANBP1P43487 201 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 NCS1P62166 190 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 KIR2DS3Q14952 304 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 MAPK11Q15759 364 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 SYPL1Q16563 259 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 ANKDD1AQ495B1 522 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 TMEM196Q5HYL7 178 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 RNLSQ5VYX0 342 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 C12orf73Q69YU5 71 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 PLAG1Q6DJT9 500 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 FAM180BQ6P0A1 224 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 DCDC5Q6ZRR9 648 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 CENPSQ8N2Z9 138 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 TMEM145Q8NBT3 493 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 VANGL1Q8TAA9 524 aaPredicted RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 POLR2J3Q9H1A7 115 aaKnown RBP11.3□□□□□ -0.6
NUP54-202ENST00000502850 ANKRD19PQ9H560 264 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 FZD3Q9NPG1 666 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms