RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GNB3P16520 340 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 PTPN6P29350 595 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 FCGR2BP31994 310 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 MTIF2P46199 727 aaKnown RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 ARFIP1P53367 373 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 RPL27P61353 136 aaKnown RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 RBBP4Q09028 425 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 GCKRQ14397 625 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 SGSM1Q2NKQ1 1148 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 DPY19L2P2Q6ZN68 376 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 Q6ZSR9 355 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZER1Q7Z7L7 766 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 VPS36Q86VN1 386 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 CENPLQ8N0S6 344 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 LINC00518Q8N0U6 118 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 RELL2Q8NC24 303 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZNF397Q8NF99 534 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 OR10T2Q8NGX3 314 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 MRGPRDQ8TDS7 321 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 ATP8B4Q8TF62 1192 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 GIPC3Q8TF64 312 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 PINX1Q96BK5 328 aaKnown RBP4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 NODALQ96S42 347 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 KRT12Q99456 494 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 COG4Q9H9E3 785 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 SLC25A19Q9HC21 320 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 SLC6A5Q9Y345 797 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 A2MP01023 1474 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 MBD5Q9P267 1494 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 CNTLNQ9NXG0 1405 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 CAMSAP1Q5T5Y3 1602 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 LTBP4Q8N2S1 1624 aa4.54□□□□□ -1.68
HMGB1P3-201ENST00000502802 POLR1AO95602 1720 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 TRIM49BA6NDI0 452 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 E9PMD0 336 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 SGK494L7N484 410 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 INPP4BO15327 924 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 STK17BO94768 372 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 HPRP00739 348 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CA3P07451 260 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CYP11B1P15538 503 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ANOS1P23352 680 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 DPP4P27487 766 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ADRA1AP35348 466 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZFP36L2P47974 494 aaKnown RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 HNMTP50135 292 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 NDST1P52848 882 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 SNRPD1P62314 119 aaKnown RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 DHODHQ02127 395 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 HLA-BQ31612 363 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 STEAP1BQ6NZ63 245 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 LRRC8BQ6P9F7 803 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 KDELC1Q6UW63 502 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ERASQ7Z444 233 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CUZD1Q86UP6 607 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CATSPERDQ86XM0 798 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 GCNT2Q8N0V5 402 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 FADS6Q8N9I5 356 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 DDHD1Q8NEL9 900 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 OR6F1Q8NGZ6 308 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 GMPPAQ96IJ6 420 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ZNF300Q96RE9 604 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 F2RL3Q96RI0 385 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 ERP44Q9BS26 406 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CLEC7AQ9BXN2 247 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 MRPL13Q9BYD1 178 aaKnown RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 NT5C3AQ9H0P0 336 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 TSPY26PQ9H489 355 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 DCTPP1Q9H773 170 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 KCNK13Q9HB14 408 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 FARSBQ9NSD9 589 aaKnown RBP4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 NLGN3Q9NZ94 848 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CSNK1G3Q9Y6M4 447 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 PTPRTO14522 1441 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 NPATQ14207 1427 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 NCOA1Q15788 1441 aa4.53□□□□□ -1.68
HMGB1P3-201ENST00000502802 CAMSAP2Q08AD1 1489 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 NCOA2Q15596 1464 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 LOC390937A0A1W2PQ73 354 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 HHLA1C9JL84 531 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 H0YCG3 227 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 E2F3O00716 465 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 TNFSF12O43508 249 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 MFN2O95140 757 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 NDUFA7O95182 113 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 FHP07954 510 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 EPB41P11171 864 aaKnown RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 PRG2P13727 222 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 PSMA5P28066 241 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 PPP2R1AP30153 589 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 OPRL1P41146 370 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 GNB1P62873 340 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 HERVK_113P63132 956 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 ERVK-8P63133 956 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC17A1Q14916 467 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 SHROOM1Q2M3G4 852 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 HKDC1Q2TB90 917 aa4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 ACSF3Q4G176 576 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P3-201ENST00000502802 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms