RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR4K14Q8NGD5 310 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 OIT3Q8WWZ8 545 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 OSTF1Q92882 214 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MBOAT4Q96T53 435 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 GABRG3Q99928 467 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 CLEC4MQ9H2X3 399 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MTHFD2LQ9H903 347 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 SCPEP1Q9HB40 452 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 HHATLQ9HCP6 504 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 POT1Q9NUX5 634 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MRTO4Q9UKD2 239 aaKnown RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MKLN1Q9UL63 735 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 KLK4Q9Y5K2 254 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 HEMK1Q9Y5R4 338 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 LYVE1Q9Y5Y7 322 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 A0A1W2PP55 124 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 A0A1W2PPW3 197 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 TLR4O00206 839 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 LINC00271P0C7V0 271 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 ETFAP13804 333 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 CTSEP14091 401 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 CD1EP15812 388 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 HIST1H1TP22492 207 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 ITGB8P26012 769 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 TIE1P35590 1138 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 XCR1P46094 333 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 DAPP51397 102 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 TAS2R41P59536 307 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 SNRPGP62308 76 aaKnown RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 LMNTD1Q8N9Z9 388 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 OR52L1Q8NGH7 329 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 RSC1A1Q92681 617 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 VWCEQ96DN2 955 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 HS6ST2Q96MM7 605 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 TRNT1Q96Q11 434 aaKnown RBP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 F2RL3Q96RI0 385 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 FEVQ99581 238 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MND1Q9BWT6 205 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 ACTRT3Q9BYD9 372 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 ABCG4Q9H172 646 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 MED17Q9NVC6 651 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFC-203ENST00000502773 SSR3Q9UNL2 185 aa7.02□□□□□ -1.29
PDGFC-203ENST00000502773 ZNF106Q9H2Y7 1883 aaKnown RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 HAT1O14929 419 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 AIREO43918 545 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 PAK4O96013 591 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 SEMG1P04279 462 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CD22P20273 847 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CD40LGP29965 261 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 XKP51811 444 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CSNK1G2P78368 415 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 HSPB3Q12988 150 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 RAPSNQ13702 412 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CLCA4Q14CN2 919 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CCDC58Q4VC31 144 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 PYCR3Q53H96 274 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 AGBL4Q5VU57 503 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 LRRC56Q8IYG6 542 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 RHOXF1Q8NHV9 184 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 TRIM8Q9BZR9 551 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CLCA2Q9UQC9 943 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 A8MV72 311 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 PRAMEF26H0Y7S4 382 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 NUPL2O15504 423 aaKnown RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 ERAL1O75616 437 aaKnown RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 GABARAPO95166 117 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 BCHEP06276 602 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 BSGP35613 385 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 STAT5AP42229 794 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 KCNJ5P48544 419 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CCR5P51681 352 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 PLA2G16P53816 162 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 SLC35A2P78381 396 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 SLAMF1Q13291 335 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 TIGD6Q17RP2 521 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 SLC5A12Q1EHB4 618 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 TCEAL5Q5H9L2 206 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 NDUFAF5Q5TEU4 345 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 DCDC5Q6ZRR9 648 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 WDR48Q8TAF3 677 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 NT5CQ8TCD5 201 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 TMEM80Q96HE8 168 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 C7orf34Q96L11 122 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 LYRM4Q9HD34 91 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 NDUFAF4Q9P032 175 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 EXOSC1Q9Y3B2 195 aaKnown RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 TMEM202A6NGA9 273 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 EFCAB9A8MZ26 197 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 B8ZZF3 427 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 MEN1O00255 615 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 DLGAP1O14490 977 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CLDN4O14493 209 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 FADS2O95864 444 aaKnown RBP7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CDK1P06493 297 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 CD36P16671 472 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 PRKACGP22612 351 aa7.01□□□□□ -1.29
PDGFC-203ENST00000502773 AQP1P29972 269 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms