RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MAT2BQ9NZL9 334 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 NPIPA5E9PKD4 350 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 PIP5K1BO14986 540 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 AGFG2O95081 481 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 UNC5CO95185 931 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 P04436 131 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 SERPINE1P05121 402 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 DHRS4L1P0CG22 281 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 S1PR1P21453 382 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 CNR1P21554 472 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 PTGER1P34995 402 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 TDGF1P3P51864 188 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 RBPJQ06330 500 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 SRSF1Q07955 248 aaKnown RBP eCLIP11.83□□□□□ -0.52
HSPG2-213ENST00000498495 MPP2Q14168 576 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 CASP8Q14790 479 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 RFTN2Q52LD8 501 aaPredicted RBP11.83□□□□□ -0.52
HSPG2-213ENST00000498495 TRMT12Q53H54 448 aaKnown RBP11.83□□□□□ -0.52
HSPG2-213ENST00000498495 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 SLC22A10Q63ZE4 541 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 DND1Q8IYX4 353 aaKnown RBP11.83□□□□□ -0.52
HSPG2-213ENST00000498495 ANKRD42Q8N9B4 389 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 GOLM1Q8NBJ4 401 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.83□□□□□ -0.52
HSPG2-213ENST00000498495 CTHRC1Q96CG8 243 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 PPP3R2Q96LZ3 170 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 CCT7Q99832 543 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 SACM1LQ9NTJ5 587 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 PRODH2Q9UF12 536 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 ZNF639Q9UID6 485 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 NPIPA1Q9UND3 350 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 OSGIN2Q9Y236 505 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 TMED5Q9Y3A6 229 aa11.83□□□□□ -0.52
HSPG2-213ENST00000498495 CLEC18AA5D8T8 446 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 TMEM114B3SHH9 223 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 LSM1O15116 133 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ASNA1O43681 348 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ITM2AO43736 263 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 LYPLA1O75608 230 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 BCAS2O75934 225 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 NADKO95544 446 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ZNF24P17028 368 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 GRK2P25098 689 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ARRB2P32121 409 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 SLC1A6P48664 564 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 NRG3P56975 720 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 KCNK10P57789 538 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ABCE1P61221 599 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 MAGOHP61326 146 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 RPL38P63173 70 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 MRPS35P82673 323 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 STX3Q13277 289 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 LTB4RQ15722 352 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 CEBPEQ15744 281 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ZNF791Q3KP31 576 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 CLEC18BQ6UXF7 455 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 FAM47EQ6ZV65 393 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 CLEC18CQ8NCF0 446 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 OR52R1Q8NGF1 315 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 OR9A2Q8NGT5 310 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ZNF675Q8TD23 568 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ADIPOR1Q96A54 375 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 SPACA9Q96E40 222 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 EGLN2Q96KS0 407 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 GPR137Q96N19 417 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 TSPAN10Q9H1Z9 355 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 TAS2R7Q9NYW3 318 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-213ENST00000498495 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
HSPG2-213ENST00000498495 ATP6AP2A0A1C7CYW4 349 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 TMEM120BA0PK00 339 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 PEX11AO75192 247 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 SEMA7AO75326 666 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-213ENST00000498495 ATP6AP2O75787 350 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 WISP2O76076 250 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
HSPG2-213ENST00000498495 CBX7O95931 251 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 JUNP05412 331 aaKnown RBP11.81□□□□□ -0.52
HSPG2-213ENST00000498495 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 PCSK2P16519 638 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 BGNP21810 368 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 GPX3P22352 226 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 TACR1P25103 407 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 MAPK1P28482 360 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 RFC3P40938 356 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 NCBP2P52298 156 aaKnown RBP eCLIP11.81□□□□□ -0.52
HSPG2-213ENST00000498495 DCAF7P61962 342 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 PLGLB1Q02325 96 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 ATP6AP1LQ52LC2 224 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 ZNF628Q5EBL2 1059 aa11.81□□□□□ -0.52
HSPG2-213ENST00000498495 RNFT1Q5M7Z0 435 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms