RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ACPTQ9BZG2 426 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 ZNF395Q9H8N7 513 aaPredicted RBP14.2□□□□□ -0.14
NUP50-219ENST00000497960 THAP1Q9NVV9 213 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 TEX10Q9NXF1 929 aaPredicted RBP14.2□□□□□ -0.14
NUP50-219ENST00000497960 ZDHHC2Q9UIJ5 367 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 SH3BGRL2Q9UJC5 107 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 ERVK-19Q9WJR5 959 aa14.2□□□□□ -0.14
NUP50-219ENST00000497960 CYSRT1A8MQ03 144 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 KLF11O14901 512 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 PGRMC2O15173 223 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 ZG16O60844 167 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 SNNO75324 88 aaPredicted RBP14.19□□□□□ -0.14
NUP50-219ENST00000497960 WISP2O76076 250 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 GPR85P60893 370 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 HMGCS1Q01581 520 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 GTF3C1Q12789 2109 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 PDCD2Q16342 344 aaPredicted RBP14.19□□□□□ -0.14
NUP50-219ENST00000497960 PIGGQ5H8A4 983 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 RNFT1Q5M7Z0 435 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 C6orf163Q5TEZ5 329 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 RNF111Q6ZNA4 994 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 SLC29A4Q7RTT9 530 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 SPPL2CQ8IUH8 684 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 ZFP62Q8NB50 900 aaPredicted RBP14.19□□□□□ -0.14
NUP50-219ENST00000497960 DOK4Q8TEW6 326 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 UCN3Q969E3 161 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 FAIM2Q9BWQ8 316 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 C20orf27Q9GZN8 174 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 VPS29Q9UBQ0 182 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 DNAJC15Q9Y5T4 150 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 PTGDR2Q9Y5Y4 395 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 NOTCH2Q04721 2471 aa14.19□□□□□ -0.14
NUP50-219ENST00000497960 C1orf226A1L170 272 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 HRKO00198 91 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 PIP5K1BO14986 540 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 CLDN1O95832 211 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 FGF4P08620 206 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 ESRRAP11474 423 aaPredicted RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 ABOP16442 354 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 RFC3P40938 356 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 RPL14P50914 215 aaKnown RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 XKP51811 444 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 OCRLQ01968 901 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 PLGLB1Q02325 96 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 TBL3Q12788 808 aaKnown RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 C3AR1Q16581 482 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 ZNF750Q32MQ0 723 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 SPDYAQ5MJ70 313 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 BNC2Q6ZN30 1099 aaPredicted RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 GALNT12Q8IXK2 581 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 C9orf40Q8IXQ3 194 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 SLC15A4Q8N697 577 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 GOLM1Q8NBJ4 401 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 C16orf52Q8NHV5 167 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 CKAP2Q8WWK9 683 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 MAGEB18Q96M61 343 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 GAL3ST4Q96RP7 486 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 MARCOQ9UEW3 520 aaPredicted RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 PSME2Q9UL46 239 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.18□□□□□ -0.14
NUP50-219ENST00000497960 ZNF835Q9Y2P0 537 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 PCDHA9Q9Y5H5 950 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 MAST4O15021 2626 aa14.18□□□□□ -0.14
NUP50-219ENST00000497960 SERTM1A2A2V5 107 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 OR6C76A6NM76 312 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 ACOT7O00154 380 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 SLC28A1O00337 649 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 RGS14O43566 566 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 RSL1D1O76021 490 aaKnown RBP14.17□□□□□ -0.14
NUP50-219ENST00000497960 P04436 131 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 LINC00032P0C843 101 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 KITP10721 976 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 CPMP14384 443 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 CNR1P21554 472 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 NT5EP21589 574 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 TRA2BP62995 288 aaKnown RBP14.17□□□□□ -0.14
NUP50-219ENST00000497960 BTKQ06187 659 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 ACSM2AQ08AH3 577 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 ACSM2BQ68CK6 577 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 Q6ZPB1 254 aaPredicted RBP14.17□□□□□ -0.14
NUP50-219ENST00000497960 GK5Q6ZS86 529 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 RNF165Q6ZSG1 346 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 DND1Q8IYX4 353 aaKnown RBP14.17□□□□□ -0.14
NUP50-219ENST00000497960 TUBB1Q9H4B7 451 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 CXorf21Q9HAI6 301 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 PFDN4Q9NQP4 134 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 SACM1LQ9NTJ5 587 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 DEPPQ9NTK1 212 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 HAO1Q9UJM8 370 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 TINAGQ9UJW2 476 aa14.17□□□□□ -0.14
NUP50-219ENST00000497960 PRRG2O14669 202 aa14.16□□□□□ -0.14
NUP50-219ENST00000497960 HS6ST1O60243 411 aa14.16□□□□□ -0.14
NUP50-219ENST00000497960 CDC40O60508 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUP50-219ENST00000497960 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
NUP50-219ENST00000497960 ERAL1O75616 437 aaKnown RBP14.16□□□□□ -0.14
NUP50-219ENST00000497960 PORP16435 677 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms