RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PRODH2Q9UF12 536 aa17.84■□□□□ 0.45
CTDSP1-213ENST00000496785 HRKO00198 91 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 NME2P1O60361 137 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 PEX11AO75192 247 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 PRPS2P11908 318 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 NME2P22392 152 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 SSTR4P31391 388 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 TMED10P49755 219 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 IGFBP7Q16270 282 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 MAPKAPK3Q16644 382 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 PIGGQ5H8A4 983 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 ZNF468Q5VIY5 522 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 R3HCC1LQ7Z5L2 792 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 CCDC116Q8IYX3 515 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 C17orf47Q8NEP4 570 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 ARL8AQ96BM9 186 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 CTHRC1Q96CG8 243 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 SGCZQ96LD1 299 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 SORT1Q99523 831 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 BARD1Q99728 777 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 SH3GL2Q99962 352 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 KLHL1Q9NR64 748 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 OLAHQ9NV23 265 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 BCAP29Q9UHQ4 241 aa17.83■□□□□ 0.44
CTDSP1-213ENST00000496785 ATP6AP2A0A1C7CYW4 349 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 CAPN14A8MX76 684 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 KLRC4-KLRK1H3BQV0 150 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 TBX19O60806 448 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 ATP6AP2O75787 350 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 CT62P0C5K7 136 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 HPCAL1P37235 193 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 SOX3P41225 446 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 NRG3P56975 720 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 KCNC4Q03721 635 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 PDCD2Q16342 344 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 C6orf136Q5SQH8 315 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 CES4AQ5XG92 561 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 IL20RBQ6UXL0 311 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 RTL4Q6ZR62 310 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 GALNTL5Q7Z4T8 443 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 LRRC34Q8IZ02 419 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 ZNF615Q8N8J6 731 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 GOLM1Q8NBJ4 401 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 POGLUT1Q8NBL1 392 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 ZFP28Q8NHY6 868 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 DOK4Q8TEW6 326 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 PPCDCQ96CD2 204 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 TSSK3Q96PN8 268 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 REEP4Q9H6H4 257 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 MANSC1Q9H8J5 431 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 LIN28AQ9H9Z2 209 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 ZNF639Q9UID6 485 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 MAPRE3Q9UPY8 281 aa17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 EIF3LQ9Y262 564 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-213ENST00000496785 MYO1GB0I1T2 1018 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 SLCO1B7G3V0H7 640 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 CLPSP04118 112 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 BCKDHAP12694 445 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 PCSK2P16519 638 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 TACR1P25103 407 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 NCBP2P52298 156 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■□□□ 13.2
CTDSP1-213ENST00000496785 DCAF7P61962 342 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 ZNF628Q5EBL2 1059 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 FAM111BQ6SJ93 734 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 C16orf47Q6ZP98 133 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 ADCY4Q8NFM4 1077 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 NR4A3Q92570 626 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 EGLN2Q96KS0 407 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 C3orf30Q96M34 536 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 NOP53Q9NZM5 478 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 NTNG1Q9Y2I2 539 aa17.81■□□□□ 0.44
CTDSP1-213ENST00000496785 ASPDHA6ND91 283 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 KLF11O14901 512 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 PDPK1O15530 556 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 PLOD3O60568 738 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 COQ9O75208 318 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 SNNO75324 88 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 OR6B1O95007 311 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 IFI6P09912 130 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 EDN3P14138 238 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 S1PR1P21453 382 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 ST13P50502 369 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 PSPHP78330 225 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 MGAT2Q10469 447 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 LTB4RQ15722 352 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 TTMPQ5BVD1 217 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 FAM180BQ6P0A1 224 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 NATD1Q8N6N6 113 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 ST6GALNAC3Q8NDV1 305 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 PSD4Q8NDX1 1056 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 OR9A2Q8NGT5 310 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 C16orf52Q8NHV5 167 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 SPACA9Q96E40 222 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 ZBED6CLQ96FA7 236 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 PRPF18Q99633 342 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 C20orf27Q9GZN8 174 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 CLMPQ9H6B4 373 aa17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 ZNF395Q9H8N7 513 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-213ENST00000496785 ATAD3AQ9NVI7 634 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms