RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	BCL2L1	Q07817	233 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HLX	Q14774	488 aa	Predicted RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PGM5	Q15124	567 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549		Q6ZPB1	254 aa	Predicted RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AQP11	Q8NBQ7	271 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MSLNL	Q96KJ4	702 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NSUN5	Q96P11	429 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TCF25	Q9BQ70	676 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZDHHC5	Q9C0B5	715 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	METTL9	Q9H1A3	318 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	VNN3	Q9NY84	501 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POLL	Q9UGP5	575 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EXOSC1	Q9Y3B2	195 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TCRBV5S1A1T	A0A578	114 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR6C68	A6NDL8	312 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NUDT19	A8MXV4	375 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF197	O14709	1029 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ARPC1B	O15143	372 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GPR37	O15354	613 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KERA	O60938	352 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BEST1	O76090	585 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CEL	P19835	753 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CNR1	P21554	472 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KLRK1	P26718	216 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CCR7	P32248	378 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BDKRB1	P46663	353 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POU3F4	P49335	361 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CAV3	P56539	151 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	P2RY14	Q15391	338 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GCNT6	Q5T4J0	391 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TSTD2	Q5T7W7	516 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SYPL2	Q5VXT5	272 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KIAA1161	Q6NSJ0	714 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	REC114	Q7Z4M0	266 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	VTCN1	Q7Z7D3	282 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACOT1	Q86TX2	421 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF227	Q86WZ6	799 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SYT12	Q8IV01	421 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RELL2	Q8NC24	303 aa	Predicted RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PROKR1	Q8TCW9	393 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SETD7	Q8WTS6	366 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PGLYRP2	Q96PD5	576 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TSSK3	Q96PN8	268 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZIC5	Q96T25	663 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KCNH6	Q9H252	994 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	METTL8	Q9H825	291 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HEBP1	Q9NRV9	189 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NDUFB11	Q9NX14	153 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	UPB1	Q9UBR1	384 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPHA6	Q9UF33	1036 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FEM1B	Q9UK73	627 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C7orf66	A4D0T2	115 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MAGEB17	A8MXT2	336 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EFCAB14	O75071	495 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LATS1	O95835	1130 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CD3G	P09693	182 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NME1	P15531	152 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPB42	P16452	691 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FOXA1	P55317	472 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PLK5	Q496M5	336 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MLIP	Q5VWP3	458 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ETFRF1	Q6IPR1	90 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LAIR2	Q6ISS4	152 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF529	Q6P280	563 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATRAID	Q6UW56	229 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DEFB106A	Q8N104	65 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TCEANC	Q8N8B7	351 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SYT14	Q8NB59	555 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	B3GALNT2	Q8NCR0	500 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF384	Q8TF68	577 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FBLIM1	Q8WUP2	373 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POLR2J3	Q9H1A7	115 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AGO4	Q9HCK5	861 aa	Known RBP	7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAS2R10	Q9NYW0	307 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GNG8	Q9UK08	70 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ST3GAL5	Q9UNP4	418 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DTX4	Q9Y2E6	619 aa		7.8	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANKRD36C	Q5JPF3	1778 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AP4M1	O00189	453 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HAS3	O00219	553 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	QSOX1	O00391	747 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IFNW1	P05000	195 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ANXA2	P07355	339 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CXCL3	P19876	107 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CPT2	P23786	658 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HOXC13	P31276	330 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CNR2	P34972	360 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AKR1C2	P52895	323 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LIMK1	P53667	647 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EPHA4	P54764	986 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RAG2	P55895	527 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RPS14	P62263	151 aa	Known RBP	7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AKR1C1	Q04828	323 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ARHGAP40	Q5TG30	622 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ADAM5	Q6NVV9	412 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAPT1	Q6NXT6	567 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZPBP2	Q6X784	338 aa		7.79	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RBMS3	Q6XE24	437 aa	Known RBP	7.79	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms