RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PMPCAQ10713 525 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 DUSP8Q13202 625 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 BICRALQ6AI39 1079 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 SLC48A1Q6P1K1 146 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 GSPT2Q8IYD1 628 aaKnown RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 LRRC25Q8N386 305 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 CEP112Q8N8E3 955 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 OR5M3Q8NGP4 307 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 ADIPOR1Q96A54 375 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 TP53INP1Q96A56 240 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 TM4SF18Q96CE8 201 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 MTBPQ96DY7 904 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 LURAP1Q96LR2 239 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 ZFP64Q9NPA5 681 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 SNX6Q9UNH7 406 aa13.12□□□□□ -0.31
VTI1A-209ENST00000496445 INTS1Q8N201 2190 aaKnown RBP13.12□□□□□ -0.31
VTI1A-209ENST00000496445 C1orf226A1L170 272 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 FAM90A27PA6NNH2 459 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 MANBAO00462 879 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 SUSD5O60279 629 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 HCN1O60741 890 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 CHN1P15882 459 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 PORP16435 677 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-209ENST00000496445 IGFBP2P18065 325 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 NT5EP21589 574 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 GPX3P22352 226 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 ACVR2AP27037 513 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 CHRNB4P30926 498 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 MAN2A2P49641 1150 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 FBXW4P57775 412 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RASA2Q15283 850 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 PRICKLE4Q2TBC4 344 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF585AQ6P3V2 769 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 C1orf52Q8N6N3 182 aaKnown RBP13.11□□□□□ -0.31
VTI1A-209ENST00000496445 CDYL2Q8N8U2 506 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 SIMC1Q8NDZ2 872 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 KIF18AQ8NI77 898 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RND1Q92730 232 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF382Q96SR6 550 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 SLC6A15Q9H2J7 730 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
VTI1A-209ENST00000496445 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 CNIH4Q9P003 139 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 BOKQ9UMX3 212 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-209ENST00000496445 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
VTI1A-209ENST00000496445 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 TRGV5A0A0B4J1U4 118 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ANKRD33BA6NCL7 494 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FIGNL2A6NMB9 653 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 GOLGA8RI6L899 631 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 SUPT7LO94864 414 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 TOXO94900 526 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ATP1B1P05026 303 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 GLI4P10075 376 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 TAC1P20366 129 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FEN1P39748 380 aaKnown RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 HTR6P50406 440 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 KRTAP10-9P60411 292 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 SLC29A2Q14542 456 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FNDC7Q5VTL7 733 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FAM180BQ6P0A1 224 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 MEX3BQ6ZN04 569 aaKnown RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ACAD11Q709F0 780 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 LCA5Q86VQ0 697 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 PRR22Q8IZ63 422 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 VWA5B2Q8N398 1253 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 C17orf47Q8NEP4 570 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 CHTF18Q8WVB6 975 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 DIO2Q92813 273 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ZNF681Q96N22 645 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 TTYH2Q9BSA4 534 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 ACPTQ9BZG2 426 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 NXF5Q9H1B4 397 aaKnown RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 LDAHQ9H6V9 325 aa13.1□□□□□ -0.31
VTI1A-209ENST00000496445 PSMC3IPQ9P2W1 217 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-209ENST00000496445 HEY2Q9UBP5 337 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms