RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 EXD2Q9NVH0 621 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 IRAK4Q9NWZ3 460 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 SOHLH2Q9NX45 425 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 SMPD3Q9NY59 655 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PTGFRNQ9P2B2 879 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 TRPC4Q9UBN4 977 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF639Q9UID6 485 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CES1P1Q9UKY3 287 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 LIPT1Q9Y234 373 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PADI2Q9Y2J8 665 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 LOC105369274A0A096LPK9 316 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 LOC102723532A0A0G2JNH3 316 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 FAM149AA5PLN7 773 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 SYNDIG1LA6NDD5 238 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 SLC9B1P1A6NJY1 282 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 H0YAE9 185 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PGRMC2O15173 223 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 ASNA1O43681 348 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 GALR3O60755 368 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 TNFAIP8O95379 198 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 STATHP02808 62 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 NR2F1P10589 423 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 RNH1P13489 461 aaKnown RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PVRP15151 417 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 ST6GAL1P15907 406 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PORP16435 677 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 DNAJA1P31689 397 aaKnown RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CCKBRP32239 447 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 XKP51811 444 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 RPS6KA3P51812 740 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CHN2P52757 468 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 MVDP53602 400 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 MERTKQ12866 999 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 DAG1Q14118 895 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 GRM7Q14831 915 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PDK3Q15120 406 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CYBRD1Q53TN4 286 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CDCP2Q5VXM1 449 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 TTC23Q5W5X9 447 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 C18orf63Q68DL7 685 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 ZCCHC12Q6PEW1 402 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 RBM44Q6ZP01 1051 aaKnown RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 USP53Q70EK8 1073 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 SLCO6A1Q86UG4 719 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 STK32CQ86UX6 486 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CYP4Z1Q86W10 505 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CCDC116Q8IYX3 515 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 ST13P4Q8IZP2 240 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 OR4N4Q8N0Y3 316 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 DNAJC22Q8N4W6 341 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF555Q8NEP9 628 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 BBS10Q8TAM1 723 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 MIPOL1Q8TD10 442 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 GEMIN6Q8WXD5 167 aaKnown RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PROX1Q92786 737 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 CCDC74AQ96AQ1 378 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 FCRL4Q96PJ5 515 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 MAP3K3Q99759 626 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 PELOQ9BRX2 385 aaKnown RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 BTBD2Q9BX70 525 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 B3GNT4Q9C0J1 378 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 KLHL25Q9H0H3 589 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 LRRN3Q9H3W5 708 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 REEP1Q9H902 201 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 FANCEQ9HB96 536 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 SIRT3Q9NTG7 399 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 KCMF1Q9P0J7 381 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 AKAP7Q9P0M2 348 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-214ENST00000495485 C3orf18Q9UK00 162 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 RNF215Q9Y6U7 377 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 IGF2RP11717 2491 aa9.65□□□□□ -0.86
HDAC3-214ENST00000495485 IGHV1OR21-1A0A087WYE8 117 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 A0A0G2JPF8 293 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 GLOD5A6NK44 160 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 HNRNPCL2B2RXH8 293 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 HNRNPCL3B7ZW38 293 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 D6RAR5 112 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 M0QX08 132 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 PLOD2O00469 737 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 P2RX6O15547 441 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 SLC28A2O43868 658 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 GPR75O95800 540 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 HNRNPCL4P0DMR1 293 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 FPR1P21462 350 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 IFNA8P32881 189 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 FEN1P39748 380 aaKnown RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 CDK9P50750 372 aaKnown RBP9.64□□□□□ -0.87
HDAC3-214ENST00000495485 PRKAG1P54619 331 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 ARSFP54793 590 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 SMIM11AP58511 58 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 HSD11B2P80365 405 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 HPCAP84074 193 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 KCNC4Q03721 635 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 RUNX2Q13950 521 aa9.64□□□□□ -0.87
HDAC3-214ENST00000495485 COX20Q5RI15 118 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms