RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ESR1P03372 595 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 ALDOAP04075 364 aaKnown RBP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 SERPINA6P08185 405 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 CCND1P24385 295 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 ADRA1DP25100 572 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 PDLIM4P50479 330 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 LIM2P55344 173 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 EIF3EP60228 445 aaKnown RBP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 CDH17Q12864 832 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 EFTUD2Q15029 972 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 USP43Q70EL4 1123 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 FBXL20Q96IG2 436 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 PINK1Q9BXM7 581 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 METTL7AQ9H8H3 244 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 FANCFQ9NPI8 374 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 ING1Q9UK53 422 aaPredicted RBP12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 TCAF1Q9Y4C2 921 aa12.96□□□□□ -0.33
CHMP2B-205ENST00000494980 SYCE3A1L190 88 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 NDUFS8O00217 210 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 GYPCP04921 128 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 TMEM253P0C7T8 217 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 MPC1LP0DKB6 136 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 CERS1P27544 350 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 ADH6P28332 368 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 HNRNPH1P31943 449 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 TTKP33981 857 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 CLCN7P51798 805 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 STXBP1P61764 594 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 RPP38P78345 283 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 REEP5Q00765 189 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 TAB1Q15750 504 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 TTLL9Q3SXZ7 439 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 TRIM40Q6P9F5 258 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 ZNF793Q6ZN11 406 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 DGAT2L6Q6ZPD8 337 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 PIWIL4Q7Z3Z4 852 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 LINC00523Q86TU6 105 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 OR6K3Q8NGY3 331 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 SLC35G2Q8TBE7 412 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 SNF8Q96H20 258 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 GALNT9Q9HCQ5 603 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 DAPP1Q9UN19 280 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 SNX8Q9Y5X2 465 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 RYR2Q92736 4967 aa12.95□□□□□ -0.34
CHMP2B-205ENST00000494980 LRP5LA4QPB2 252 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 H0YC42 278 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 DYRK3O43781 588 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 SPOPO43791 374 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 SLC1A1P43005 524 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 STT3AP46977 705 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 TMED10P49755 219 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 TPD52P55327 224 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 HERVK_113P63132 956 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 ERVK-8P63133 956 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 PON3Q15166 354 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 CARTPTQ16568 116 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 LUZP1Q86V48 1076 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 RHOT2Q8IXI1 618 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 OR8K1Q8NGG5 319 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 PPWD1Q96BP3 646 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 TSNARE1Q96NA8 513 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 DGAT2Q96PD7 388 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 OR4K3Q96R72 315 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 ERVK-6Q9BXR3 956 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 ERVK-19Q9WJR5 959 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 EMC9Q9Y3B6 208 aa12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP2B-205ENST00000494980 A0A088AWK7 358 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 IQANK1A0A1B0GTG1 560 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 PABPN1LA6NDY0 278 aaKnown RBP12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 CDH16O75309 829 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 CBR3O75828 277 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 ZNF10P21506 573 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 IL2RGP31785 369 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 NEK2P51955 445 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 CLDN15P56746 228 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 RCN2Q14257 317 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 CSHL1Q14406 222 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 FIGNL1Q6PIW4 674 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 CYHR1Q6ZMK1 362 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 THSD4Q6ZMP0 1018 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 BEND4Q6ZU67 534 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
CHMP2B-205ENST00000494980 PRR22Q8IZ63 422 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms