RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 TRMT12Q53H54 448 aaKnown RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SLC48A1Q6P1K1 146 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SLC16A11Q8NCK7 471 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SLC35G5Q96KT7 338 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ALPK1Q96QP1 1244 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 FBXO34Q9NWN3 711 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 GPR83Q9NYM4 423 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 OR6C2Q9NZP2 312 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 CPNE7Q9UBL6 633 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 WARS2Q9UGM6 360 aaKnown RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ENPP4Q9Y6X5 453 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 CACNA1IQ9P0X4 2223 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 THEGLP0DJG4 465 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 NR2F1P10589 423 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 CHRNEQ04844 493 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 RBBP4Q09028 425 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SOWAHCQ53LP3 525 aaPredicted RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ZC3H12BQ5HYM0 836 aaKnown RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 RBM48Q5RL73 367 aaKnown RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ZNF770Q6IQ21 691 aaPredicted RBP9.78□□□□□ -0.84
SAMM50-206ENST00000494795 FIGLAQ6QHK4 219 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 DGAT2L6Q6ZPD8 337 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ARMC8Q8IUR7 673 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 IQCF1Q8N6M8 205 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SLC7A13Q8TCU3 470 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ZFAND2BQ8WV99 257 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 SPATA9Q9BWV2 254 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 KCMF1Q9P0J7 381 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 ANKMY1Q9P2S6 941 aa9.78□□□□□ -0.84
SAMM50-206ENST00000494795 NPIPA5A0A0B4J1W7 369 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 OR2A25A4D2G3 310 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 B4DGG1 531 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 NPIPA7E9PJI5 369 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 H0YGG7 62 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 TOR1BO14657 336 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 MBTPS2O43462 519 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 NPIPA8P0DM63 369 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 CHRNB1P11230 501 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 MYF5P13349 255 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 ARF3P61204 181 aaPredicted RBP9.77□□□□□ -0.84
SAMM50-206ENST00000494795 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.84
SAMM50-206ENST00000494795 ZC3H14Q6PJT7 736 aaKnown RBP9.77□□□□□ -0.84
SAMM50-206ENST00000494795 TAF8Q7Z7C8 310 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 ASPGQ86U10 573 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 GEMIN6Q8WXD5 167 aaKnown RBP9.77□□□□□ -0.84
SAMM50-206ENST00000494795 IL4I1Q96RQ9 567 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 CAPN10Q9HC96 672 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 NEUROD4Q9HD90 331 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 A4GALTQ9NPC4 353 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 C11orf16Q9NQ32 467 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 HRASLS2Q9NWW9 162 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 USP36Q9P275 1121 aaKnown RBP9.77□□□□□ -0.84
SAMM50-206ENST00000494795 SEC14L3Q9UDX4 400 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 MKLN1Q9UL63 735 aa9.77□□□□□ -0.84
SAMM50-206ENST00000494795 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 LRRC72A6NJI9 287 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 SDC3O75056 442 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 UGT2B11O75310 529 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 CDC123O75794 336 aaPredicted RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 APBB3O95704 486 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 GSTM2P28161 218 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PTGES3Q15185 160 aaKnown RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 TRIM48Q8IWZ4 208 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PHF10Q8WUB8 498 aaKnown RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 LZICQ8WZA0 190 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ELP4Q96EB1 424 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 GIMAP5Q96F15 307 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 HRASLS5Q96KN8 279 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 RNF167Q9H6Y7 350 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 IL21RQ9HBE5 538 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 THSD1Q9NS62 852 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 TAS2R7Q9NYW3 318 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PILRAQ9UKJ1 303 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 MAPRE3Q9UPY8 281 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 SPAG17Q6Q759 2223 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 hCG_2014768A0A024R1R8 64 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ADAMDEC1O15204 470 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 FAM20BO75063 409 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 BCAS1O75363 584 aaPredicted RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 DNAJB5O75953 348 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 IFNW1P05000 195 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ST6GAL1P15907 406 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 CHMP24386 653 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 AHRP35869 848 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 BUD31P41223 144 aaPredicted RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 KCNJ5P48544 419 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PDX1P52945 283 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 KEAP1Q14145 624 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ERV3-1Q14264 604 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 SYT16Q17RD7 645 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 GPAT3Q53EU6 434 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 ERI1Q8IV48 349 aaKnown RBP9.77□□□□□ -0.85
SAMM50-206ENST00000494795 CLIP4Q8N3C7 705 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 FAM46DQ8NEK8 389 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 PSMA8Q8TAA3 256 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 MUL1Q969V5 352 aa9.77□□□□□ -0.85
SAMM50-206ENST00000494795 QRFPRQ96P65 431 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms