RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NR4A3Q92570 626 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 NSMAFQ92636 917 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 NUS1Q96E22 293 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF559Q9BR84 538 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ERVK-6Q9BXR3 956 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 POTEKPQ9BYX7 375 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ACTR6Q9GZN1 396 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SNX15Q9NRS6 342 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 RAB6BQ9NRW1 208 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CATSPERZQ9NTU4 200 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 SPHK1Q9NYA1 384 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ERVK-18Q9QC07 812 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CD84Q9UIB8 345 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 ALG5Q9Y673 324 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 CACNA1EQ15878 2313 aa11.01□□□□□ -0.65
BRCA1-222ENST00000493919 PCDH15Q96QU1 1955 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 POM121BA6NF01 834 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 NPIPB8E9PQR5 432 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 TBX1O43435 398 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 DPM1O60762 260 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 CLDN7O95471 211 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 DLGAP3O95886 979 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 SYPP08247 313 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 ATXN1LP0C7T5 689 aaKnown RBP11□□□□□ -0.65
BRCA1-222ENST00000493919 IGFBP5P24593 272 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 CCR7P32248 378 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 ABCE1P61221 599 aaKnown RBP11□□□□□ -0.65
BRCA1-222ENST00000493919 CTBSQ01459 385 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 PRKAA1Q13131 559 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 SLC1A5Q15758 541 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 TBCCQ15814 346 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 KCNMB1Q16558 191 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 SLC36A3Q495N2 470 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 FLYWCH1Q4VC44 716 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 ATP13A5Q4VNC0 1218 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 HSD11B1LQ7Z5J1 315 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 COMMD7Q86VX2 200 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 PPP1R3BQ86XI6 285 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 OR13H1Q8NG92 308 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 OR2L8Q8NGY9 312 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 THRSPQ92748 146 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 ATP6V0BQ99437 205 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 KLF6Q99612 283 aaPredicted RBP11□□□□□ -0.65
BRCA1-222ENST00000493919 TBL1YQ9BQ87 522 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 WDR26Q9H7D7 661 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 MBNL1Q9NR56 388 aaKnown RBP11□□□□□ -0.65
BRCA1-222ENST00000493919 PAK5Q9P286 719 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 IFT80Q9P2H3 777 aaPredicted RBP11□□□□□ -0.65
BRCA1-222ENST00000493919 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 GPR45Q9Y5Y3 372 aa11□□□□□ -0.65
BRCA1-222ENST00000493919 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 GDF9O60383 454 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 EDF1O60869 148 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 EIF3GO75821 320 aaKnown RBP eCLIP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 FGF1P05230 155 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 C1SP09871 688 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ACSM4P0C7M7 580 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SERPINB10P48595 397 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SLC18A1P54219 525 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SOX8P57073 446 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CRTC2Q53ET0 693 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CLLU1Q5K131 121 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 GPR107Q5VW38 600 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 IL27RAQ6UWB1 636 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ISLR2Q6UXK2 745 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 Q6ZVL8 140 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CENPUQ71F23 418 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 GLT6D1Q7Z4J2 308 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TMEM200AQ86VY9 491 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SLC35F3Q8IY50 421 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 MFSD4AQ8N468 514 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SPATA6LQ8N4H0 392 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CREB3L4Q8TEY5 395 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 RBPMSQ93062 196 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DTD2Q96FN9 168 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 KLHDC7BQ96G42 594 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ZNF385AQ96PM9 386 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DMRTA2Q96SC8 542 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 NAT9Q9BTE0 207 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ILKAPQ9H0C8 392 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DDX31Q9H8H2 851 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 FOLH1BQ9HBA9 442 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 APOBEC3BQ9UH17 382 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TMPRSS11EQ9UL52 423 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 DRG1Q9Y295 367 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SNX11Q9Y5W9 270 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 SPEGQ15772 3267 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 LOC285095A0A1B0GVY8 99 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 A0A1W2PR77 199 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 H7C1Q1 480 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 TLR4O00206 839 aa10.99□□□□□ -0.65
BRCA1-222ENST00000493919 CPNE3O75131 537 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms