RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 DENND4CQ5VZ89 1909 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 TRIM49BA6NDI0 452 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 SHISA9B4DS77 424 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 F8VVB4 439 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 F8VWA3 439 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 H3BQV1 296 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 HCRTO43612 131 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 TBX10O75333 385 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 LUC7L3O95232 432 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 LYPLA2O95372 231 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 YEATS4O95619 227 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 GH1P01241 217 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 CMA1P23946 247 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 GNA11P29992 359 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 CDC25CP30307 473 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 PRPHP41219 470 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 TNFSF9P41273 254 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZFP36L2P47974 494 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 CASP4P49662 377 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZNF131P52739 623 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 NDST2P52849 883 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 CCL23P55773 120 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ERVK-16P61578 105 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 DEFB103AP81534 67 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 PDIA5Q14554 519 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZNF146Q15072 292 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 FAM174BQ3ZCQ3 159 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZCWPW2Q504Y3 356 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 TCP11X2Q5H9J9 407 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 FAM182AQ5T1J6 154 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 GALNT17Q6IS24 598 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 RPUSD3Q6P087 351 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 TTC27Q6P3X3 843 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 RBM43Q6ZSC3 357 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 MIER3Q7Z3K6 550 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 SLC25A42Q86VD7 318 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 SERINC5Q86VE9 423 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 FAM228AQ86W67 206 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 HPS6Q86YV9 775 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 C4orf19Q8IY42 314 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 ZNF713Q8N859 430 aaPredicted RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 CCDC89Q8N998 374 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 OR52B6Q8NGF0 335 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 MRPS27Q92552 414 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 RAD54LQ92698 747 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 CASP10Q92851 521 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 BADQ92934 168 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 NXPE2Q96DL1 559 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 CPB2Q96IY4 423 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 RBM41Q96IZ5 413 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 RMDN2Q96LZ7 410 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 GDAP1L1Q96MZ0 367 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ZMAT2Q96NC0 199 aaKnown RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 ATF6BQ99941 703 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 NAA11Q9BSU3 229 aaPredicted RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 TRIM9Q9C026 710 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 SNX25Q9H3E2 840 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ST6GALNAC4Q9H4F1 302 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 RABEP2Q9H5N1 569 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 PHPT1Q9NRX4 125 aaPredicted RBP2.94□□□□□ -1.94
CD46-217ENST00000493796 HES2Q9Y543 173 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 LIPGQ9Y5X9 500 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 OBSL1O75147 1896 aa2.94□□□□□ -1.94
CD46-217ENST00000493796 ANAPC1Q9H1A4 1944 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 BRWD1Q9NSI6 2320 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 MYO15AQ9UKN7 3530 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 hCG_38984A0A1B0GV85 526 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 A0A1W2PPW3 197 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 A8MVM7 634 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 RNF103O00237 685 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 RTCAO00442 366 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 SLC16A4O15374 487 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 RECQL5O94762 991 aaPredicted RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 TCF4P15884 667 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 BCL3P20749 454 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 C4BPBP20851 252 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 DNAJB1P25685 340 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 PSMA3P25788 255 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 EEF1DP29692 281 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 CD52P31358 61 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 YWHABP31946 246 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 GPR183P32249 361 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 CCT6AP40227 531 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 QARSP47897 775 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 RGS7P49802 495 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 GPC3P51654 580 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 CLDN17P56750 224 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 FKBP3Q00688 224 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 AKAP17AQ02040 695 aaKnown RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 SULT2A1Q06520 285 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 SPAG1Q07617 926 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 LAMTOR4Q0VGL1 99 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 KIAA0141Q14154 515 aaPredicted RBP2.93□□□□□ -1.94
CD46-217ENST00000493796 SHHQ15465 462 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 HYAL4Q2M3T9 481 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 C15orf32Q32M92 178 aa2.93□□□□□ -1.94
CD46-217ENST00000493796 KRBOX4Q5JUW0 171 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms