RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ABHD1Q96SE0 405 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 CHIAQ9BZP6 476 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 LDAHQ9H6V9 325 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SEMA3GQ9NS98 782 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 NLGN3Q9NZ94 848 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 PTTG3PQ9NZH4 202 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 NDOR1Q9UHB4 597 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 STON1Q9Y6Q2 735 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 PATJQ8NI35 1801 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 MEIKINA0A087WXM9 373 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 MGAT4DA6NG13 374 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 G3V3Q6 166 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 GABRPO00591 440 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SIGLEC5O15389 551 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 HRO43593 1189 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.635e-7■■■■□ 20.9
HDAC4-210ENST00000493582 KIAA1024LP59773 190 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SIGLEC14Q08ET2 396 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 DUSP6Q16828 381 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 GGTA1PQ4G0N0 100 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SPIN4Q56A73 249 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 RPS26P11Q5JNZ5 115 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 NHLRC3Q5JS37 347 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 DCST1Q5T197 706 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 FAM180BQ6P0A1 224 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 MEX3DQ86XN8 651 aaKnown RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 CIDECQ96AQ7 238 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SCRN2Q96FV2 425 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 OR2M2Q96R28 347 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 RSPO3Q9BXY4 272 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 DPAGT1Q9H3H5 408 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 OR6C2Q9NZP2 312 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF282Q9UDV7 671 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 CLCA2Q9UQC9 943 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 ZFP37Q9Y6Q3 630 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 EIF4EP06730 217 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 DRD5P21918 477 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 HMGB2P26583 209 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SLC6A4P31645 630 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 AKR1D1P51857 326 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GAS1P54826 345 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 TSPAN5P62079 268 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 RAE1P78406 368 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SEMG2Q02383 582 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 NFATC2Q13469 925 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GINS1Q14691 196 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 OPCMLQ14982 345 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CD200R1LQ6Q8B3 271 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 THEM5Q8N1Q8 247 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 TTC9BQ8N6N2 239 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GIMAP1Q8WWP7 306 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ERMAPQ96PL5 475 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 WFDC6Q9BQY6 131 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 IL26Q9NPH9 171 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SLC35C2Q9NQQ7 365 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ACSL5Q9ULC5 683 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 RUVBL1Q9Y265 456 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 OR5K4A6NMS3 321 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 HPXP02790 462 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 LPLP06858 475 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CD3GP09693 182 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 LIMS3P0CW19 117 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 LIMS4P0CW20 117 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 HSD3B1P14060 373 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ELAVL4P26378 380 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 LCN1P31025 176 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ZP1P60852 638 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 MC1RQ01726 317 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 IRF8Q02556 426 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 GNA13Q14344 377 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 XKR6Q5GH73 641 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CD300LGQ6UXG3 332 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 DEF8Q6ZN54 512 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 TECPR1Q7Z6L1 1165 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 FAM26EQ8N5C1 309 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SAMD12Q8N8I0 201 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ZNF527Q8NB42 609 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 DBF4BQ8NFT6 615 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 OR6K2Q8NGY2 324 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 FUBP3Q96I24 572 aaKnown RBP eCLIP11.08□□□□□ -0.646e-8■■■■■ 32.5
HDAC4-210ENST00000493582 FCRL1Q96LA6 429 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 WRAP53Q9BUR4 548 aaKnown RBP11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CACNG6Q9BXT2 260 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 NMRK2Q9NPI5 230 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 NKIRAS2Q9NYR9 191 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 KIF25Q9UIL4 384 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 FBXL2Q9UKC9 423 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 AP1M2Q9Y6Q5 423 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 F5H5T6 163 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 SYN3O14994 580 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 ACSL4O60488 711 aa11.08□□□□□ -0.64
HDAC4-210ENST00000493582 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms