RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NUP214P35658 2090 aaPredicted RBP10.78□□□□□ -0.68
CTSA-209ENST00000493522 ABCA12Q86UK0 2595 aa10.77□□□□□ -0.68
CTSA-209ENST00000493522 HRKO00198 91 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 PDPK1O15530 556 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 DIAPH2O60879 1101 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 G6PDP11413 515 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 EPHA3P29320 983 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 EMX2Q04743 252 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 LTB4RQ15722 352 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 SMU1Q2TAY7 513 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 RNF111Q6ZNA4 994 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 RGS9BPQ6ZS82 235 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 MAVSQ7Z434 540 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 SAMD14Q8IZD0 417 aaPredicted RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 FAM9CQ8IZT9 166 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 BEST3Q8N1M1 668 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 RBMXL3Q8N7X1 1067 aaKnown RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 APCDD1LQ8NCL9 501 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 ADCY4Q8NFM4 1077 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 OR9A2Q8NGT5 310 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 ZNF721Q8TF20 911 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 THAP3Q8WTV1 239 aaPredicted RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 ZNF354BQ96LW1 612 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 WDR55Q9H6Y2 383 aaPredicted RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 CXorf21Q9HAI6 301 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 ZBTB20Q9HC78 741 aaPredicted RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTSA-209ENST00000493522 ASIC5Q9NY37 505 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 ABI3Q9P2A4 366 aa10.77□□□□□ -0.69
CTSA-209ENST00000493522 ZNF223Q9UK11 482 aaPredicted RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 PPIEQ9UNP9 301 aaKnown RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 EXO1Q9UQ84 846 aaKnown RBP10.77□□□□□ -0.69
CTSA-209ENST00000493522 ZFAND5O76080 213 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 F10P00742 488 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ATP1B1P05026 303 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 CT62P0C5K7 136 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 DDX5P17844 614 aaKnown RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 SSTR4P31391 388 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 GALNSP34059 522 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 RPL3P39023 403 aaKnown RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 GPR143P51810 404 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 NCBP2P52298 156 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTSA-209ENST00000493522 DIO3P55073 304 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ARG2P78540 354 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 GUCY1A3Q02108 690 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 PDE7AQ13946 482 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 MEP1AQ16819 746 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 PRSS53Q2L4Q9 553 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 SLC9B1Q4ZJI4 515 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ZNF385BQ569K4 471 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ZNF787Q6DD87 383 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 OGFOD2Q6N063 350 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 FAM111BQ6SJ93 734 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 HSDL2Q6YN16 418 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ACAD11Q709F0 780 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 LARP4Q71RC2 724 aaKnown RBP eCLIP10.76□□□□□ -0.695e-11■■□□□ 11.8
CTSA-209ENST00000493522 R3HCC1LQ7Z5L2 792 aaKnown RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 CCDC116Q8IYX3 515 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 LRRC34Q8IZ02 419 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 VWA5B2Q8N398 1253 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ZADH2Q8N4Q0 377 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 SENP5Q96HI0 755 aaPredicted RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 C5orf34Q96MH7 638 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ZNF681Q96N22 645 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 GAL3ST4Q96RP7 486 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 CDCP1Q9H5V8 836 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 MAT2BQ9NZL9 334 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 SH3BP4Q9P0V3 963 aa10.76□□□□□ -0.69
CTSA-209ENST00000493522 ERRFI1Q9UJM3 462 aaPredicted RBP10.76□□□□□ -0.69
CTSA-209ENST00000493522 DYTNA2CJ06 578 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 WIPF3A6NGB9 483 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 GABRR3A8MPY1 467 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 MYO1GB0I1T2 1018 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 FCHO1O14526 889 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 PRKNO60260 465 aaPredicted RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 MAN1A2O60476 641 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 EDF1O60869 148 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 CLDN1O95832 211 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 LDLRP01130 860 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 IGKV3-11P04433 115 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ALDOCP09972 364 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 COL8A1P27658 744 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 DCTP40126 519 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ST13P50502 369 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 RNF4P78317 190 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 MRPS35P82673 323 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 HSPB3Q12988 150 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ELOAQ14241 798 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 EXOSC7Q15024 291 aaKnown RBP10.75□□□□□ -0.69
CTSA-209ENST00000493522 PRICKLE4Q2TBC4 344 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 ACER2Q5QJU3 275 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 H3F3CQ6NXT2 135 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 SLC29A4Q7RTT9 530 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 SPATA19Q7Z5L4 167 aa10.75□□□□□ -0.69
CTSA-209ENST00000493522 C9orf40Q8IXQ3 194 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms