RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TGFB1P01137 390 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 C1QAP02745 245 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 LTA4HP09960 611 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 PCNAP12004 261 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 NAGAP17050 411 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 CEACAM8P31997 349 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 STX2P32856 288 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 PIGAP37287 484 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 KIR2DL3P43628 341 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 PIK3CGP48736 1102 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TMED10P49755 219 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 RAP1GDS1P52306 607 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 SLC37A1P57057 533 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 GNG11P61952 73 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 KCNJ2P63252 427 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 DAZAP2Q15038 168 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ACAP2Q15057 778 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 NTRK2Q16620 822 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 NHSL2Q5HYW2 709 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TMEM198Q66K66 360 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 MRM1Q6IN84 353 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 RNF111Q6ZNA4 994 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 CAMKMTQ7Z624 323 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 PM20D2Q8IYS1 436 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ULK2Q8IYT8 1036 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 LIX1Q8N485 282 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 HUS1BQ8NHY5 278 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TRPC4APQ8TEL6 797 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 FAM222BQ8WU58 562 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 RIT1Q92963 219 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ESAMQ96AP7 390 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TRIM31Q9BZY9 425 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ALG9Q9H6U8 611 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 EXO5Q9H790 373 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 SAYSD1Q9NPB0 183 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 SNX15Q9NRS6 342 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 DNAJB12Q9NXW2 375 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 CNOT11Q9UKZ1 510 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ACOT9Q9Y305 439 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 ASB4Q9Y574 426 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TNPO3Q9Y5L0 923 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 LIPGQ9Y5X9 500 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 SETD2Q9BYW2 2564 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 A0A087X1B8 175 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 G3V3Y1 287 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 H0YC42 278 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 RTCAO00442 366 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 PLPP1O14494 284 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 SEMA3DO95025 777 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 STAMBPO95630 424 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 HPNP05981 417 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 CELA3AP09093 270 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 MTHFD2P13995 350 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 CD99P14209 185 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ENDOUP21128 410 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ADH7P40394 386 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 NR0B1P51843 470 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 IST1P53990 364 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ALDH18A1P54886 795 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 TPD52P55327 224 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 DLX5P56178 289 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 GPX6P59796 221 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 EBPQ15125 230 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 PCBP2Q15366 365 aaKnown RBP eCLIP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 FAM83EQ2M2I3 478 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 TMEM81Q6P7N7 255 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 LACC1Q8IV20 430 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 LIX1LQ8IVB5 337 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 OR4N5Q8IXE1 308 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF441Q8N8Z8 693 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 L3MBTL4Q8NA19 623 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 OR7G1Q8NGA0 311 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 NTNG2Q96CW9 530 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 MBD6Q96DN6 1003 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 DOHHQ9BU89 302 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ANGPTL4Q9BY76 406 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 POLDIP3Q9BY77 421 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 PIF1Q9H611 641 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 PROK2Q9HC23 129 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 SEMA4BQ9NPR2 832 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 DMRT3Q9NQL9 472 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 RASSF1Q9NS23 344 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 SPRR3Q9UBC9 169 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
HDAC3-212ENST00000492407 FETUBQ9UGM5 382 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 ANGPTL3Q9Y5C1 460 aa8.39□□□□□ -1.07
HDAC3-212ENST00000492407 A0A0A6YYD5 115 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 MYOCOSA0A1B0GUC4 107 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 C2orf92A0A1B0GVN3 265 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 LRRC3CA6NJW4 275 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 SUPT3HB4E1H0 165 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 OR10H2O60403 315 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 SUPT3HO75486 399 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 FAM155BO75949 473 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 IL18BPO95998 194 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 IL2RAP01589 272 aa8.38□□□□□ -1.07
HDAC3-212ENST00000492407 RFPL3SP0C7P2 107 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms