RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C11orf24Q96F05 449 aaPredicted RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF681Q96N22 645 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 CNPPD1Q9BV87 410 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 VPS11Q9H270 941 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 WDR41Q9HAD4 459 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 BRF2Q9HAW0 419 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 AHSPQ9NZD4 102 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 XPR1Q9UBH6 696 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 MTRF1LQ9UGC7 380 aaKnown RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 KCNN3Q9UGI6 736 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 FETUBQ9UGM5 382 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 BOKQ9UMX3 212 aaPredicted RBP7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 NPFFR2Q9Y5X5 522 aa7.69□□□□□ -1.18
SMARCB1-207ENST00000491967 NKX2-6A6NCS4 301 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 AHRRA9YTQ3 701 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM47E-STBD1D6RA91 191 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 SYT5O00445 386 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 TO15178 435 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OR10H2O60403 315 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ACSL3O95573 720 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 EPPINO95925 133 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OTCP00480 354 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 GBAP04062 536 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 HPNP05981 417 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 KLK1P06870 262 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ABCB1P08183 1280 aaPredicted RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 INHBAP08476 426 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ABHD2P08910 425 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 GABRA1P14867 456 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 PORP16435 677 aaPredicted RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 GPX3P22352 226 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 PIK3R1P27986 724 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 CEACAM8P31997 349 aaPredicted RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 HSD17B3P37058 310 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 CASP3P42574 277 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ZFP36L2P47974 494 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 XKP51811 444 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 CCNG1P51959 295 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 DLX5P56178 289 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 TLE4Q04727 773 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 DUSP8Q13202 625 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 RPS6KA2Q15349 733 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC25A35Q3KQZ1 300 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 FBXL19-AS1Q494R0 122 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 C1orf185Q5T7R7 199 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF585AQ6P3V2 769 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 PAGE2Q7Z2X7 111 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 COMMD6Q7Z4G1 85 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 MILR1Q7Z6M3 343 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 GALNT12Q8IXK2 581 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OR4F6Q8NGB9 312 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OR5M9Q8NGP3 310 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OR5M3Q8NGP4 307 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 DOK4Q8TEW6 326 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 CHTF18Q8WVB6 975 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 RNF138Q8WVD3 245 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 SREK1Q8WXA9 508 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 TMEM41AQ96HV5 264 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 FMO2Q99518 471 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 MRPL1Q9BYD6 325 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 TXLNGYQ9BZA5 131 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 OR10A5Q9H207 317 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 MRPL46Q9H2W6 279 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC24A3Q9HC58 644 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 FARSBQ9NSD9 589 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 SIRT5Q9NXA8 310 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 ACAD8Q9UKU7 415 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 AKAP9Q99996 3911 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 PCNX3Q9H6A9 2034 aa7.68□□□□□ -1.18
SMARCB1-207ENST00000491967 MED12LQ86YW9 2145 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 PRRC2AP48634 2157 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 A0A087WUV0 522 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 C1orf226A1L170 272 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 A8MT66 165 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CAPN14A8MX76 684 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TRIM49D1C9J1S8 452 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TP53I11O14683 189 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 SMIM24O75264 130 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CDH16O75309 829 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 GUCY1B2O75343 617 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 URI1O94763 535 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 PDYNP01213 254 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 SNRPAP09012 282 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 HSD3B1P14060 373 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CSNK2A2P19784 350 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 DRD5P21918 477 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 HSD3B2P26439 372 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 ABCD3P28288 659 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 TIMP3P35625 211 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 PTGDSP41222 190 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CDK9P50750 372 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 MAPK12P53778 367 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CDH13P55290 713 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 FBXW4P57775 412 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 KCNJ2P63252 427 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CRYZQ08257 329 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 IFT88Q13099 833 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 SNTA1Q13424 505 aa7.67□□□□□ -1.18
SMARCB1-207ENST00000491967 CEBPEQ15744 281 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms