RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 USP22Q9UPT9 525 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 RUVBL1Q9Y265 456 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 FARSAQ9Y285 508 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ASB1Q9Y576 335 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SCN3AQ9NY46 2000 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SEC16AO15027 2179 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 HYKKA2RU49 373 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 PABPN1LA6NDY0 278 aaKnown RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF891A8MT65 544 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 KLK8O60259 260 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 BCAS1O75363 584 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CREG1O75629 220 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 PCNAP12004 261 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 IL7RP16871 459 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GGT1P19440 569 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 BCL6P41182 706 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 TMED10P49755 219 aaKnown RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MTPNP58546 118 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CDC20Q12834 499 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 IL10RAQ13651 578 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GRM7Q14831 915 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OXA1LQ15070 435 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 TBR1Q16650 682 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 DLEU7Q6UYE1 221 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 COX15Q7KZN9 410 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 KLHDC8AQ8IYD2 350 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 SHISA5Q8N114 240 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OR4K1Q8NGD4 311 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OR8J3Q8NGG0 315 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OR2T11Q8NH01 316 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 EXTL1Q92935 676 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 SH3YL1Q96HL8 342 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CSF3RQ99062 836 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CGREF1Q99674 301 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 BCL7BQ9BQE9 202 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GPR87Q9BY21 358 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 DGCR6LQ9BY27 220 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MROQ9BYG7 248 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 NLNQ9BYT8 704 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GORASP2Q9H8Y8 452 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GIN1Q9NXP7 522 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 NDOR1Q9UHB4 597 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ENPP5Q9UJA9 477 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 C3orf18Q9UK00 162 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 SRPK3Q9UPE1 567 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MRPS2Q9Y399 296 aaKnown RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GNGT2O14610 69 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 DSCR3O14972 297 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 PRAMEF4O60810 478 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 KLF7O75840 302 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 WDR47O94967 919 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CST1P01037 141 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ALOX5P09917 674 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 RAB40ALP0C0E4 278 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 IL12AP29459 219 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 IDUAP35475 653 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 GGT5P36269 586 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OPRL1P41146 370 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OR1D4P47884 311 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 DCDP81605 110 aaKnown RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 IMPG1Q17R60 797 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 NKAIN1Q4KMZ8 207 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 PRAMEF9Q5VWM5 478 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MLIPQ5VWP3 458 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 SULT1C3Q6IMI6 304 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ANKRD13BQ86YJ7 626 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 PARP8Q8N3A8 854 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CSNK1A1LQ8N752 337 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 TTC29Q8NA56 475 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 CHDHQ8NE62 594 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MUL1Q969V5 352 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 FKBP10Q96AY3 582 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 TM4SF19Q96DZ7 209 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 NODALQ96S42 347 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF382Q96SR6 550 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 DPH2Q9BQC3 489 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-219ENST00000491747 OSBPL10Q9BXB5 764 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 USE1Q9NZ43 259 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF225Q9UK10 706 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 MAU2Q9Y6X3 613 aa8.86□□□□□ -0.99
BRCA1-219ENST00000491747 ZFYVE26Q68DK2 2539 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 KCNE1BA0A087WTH5 132 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 A0A1B0GX78 115 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 GSTA4O15217 222 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 UGT2B11O75310 529 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 ONECUT2O95948 504 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 AGXTP21549 392 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 HSPA7P48741 367 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 EIF2B2P49770 351 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 AGTR2P50052 363 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 HNMTP50135 292 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 MLLT10P55197 1068 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 RPS15P62841 145 aaKnown RBP8.85□□□□□ -0.99
BRCA1-219ENST00000491747 PPP2R2BQ00005 443 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 PWP1Q13610 501 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 SPCS2Q15005 226 aa8.85□□□□□ -0.99
BRCA1-219ENST00000491747 NCF4Q15080 339 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms