RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 DUSP2Q05923 314 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 RASA2Q15283 850 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 PRICKLE4Q2TBC4 344 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 TAGAPQ8N103 731 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 CA5BP1Q8WTZ4 195 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 L3HYPDHQ96EM0 354 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 TRIM8Q9BZR9 551 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 ZFP64Q9NPA5 681 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 NMRK1Q9NWW6 199 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 PSMC3IPQ9P2W1 217 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-219ENST00000491183 TBK1Q9UHD2 729 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF639Q9UID6 485 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 EMCNQ9ULC0 261 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 RNF6Q9Y252 685 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 NPFFR2Q9Y5X5 522 aa16.55■□□□□ 0.24
HMGN1-219ENST00000491183 FBN2P35556 2912 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 FREM3P0C091 2139 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 BCKDKO14874 412 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ERAL1O75616 437 aaKnown RBP16.54■□□□□ 0.24
HMGN1-219ENST00000491183 KRT6AP02538 564 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 KRT6BP04259 564 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 GSTA1P08263 222 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ENDOUP21128 410 aaKnown RBP16.54■□□□□ 0.24
HMGN1-219ENST00000491183 KRT6CP48668 564 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 MAN2A2P49641 1150 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 HTR6P50406 440 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 NUP107P57740 925 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 FBXW4P57775 412 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 RAE1P78406 368 aaKnown RBP16.54■□□□□ 0.24
HMGN1-219ENST00000491183 PMPCAQ10713 525 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 MAP4K2Q12851 820 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 DUSP8Q13202 625 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 FAM180BQ6P0A1 224 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 SH2D5Q6ZV89 423 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 GPRIN3Q6ZVF9 776 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 LRRC25Q8N386 305 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ACBD4Q8NC06 268 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 SIMC1Q8NDZ2 872 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 OR7G1Q8NGA0 311 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 METTL6Q8TCB7 284 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 RND1Q92730 232 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF681Q96N22 645 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ENKD1Q9H0I2 346 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 LDAHQ9H6V9 325 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF703Q9H7S9 590 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-219ENST00000491183 MAT2BQ9NZL9 334 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 SPRR3Q9UBC9 169 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 HEY2Q9UBP5 337 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 DTX4Q9Y2E6 619 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 LRBAP50851 2863 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 APCP25054 2843 aa16.54■□□□□ 0.24
HMGN1-219ENST00000491183 EXPH5Q8NEV8 1989 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 TRGV5A0A0B4J1U4 118 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 TRIM3O75382 744 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 SHBGP04278 402 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 ATP1B1P05026 303 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 HSD3B1P14060 373 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 CSNK2A2P19784 350 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 GPX3P22352 226 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 HSD3B2P26439 372 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 TRA2BP62995 288 aaKnown RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 CSTF3Q12996 717 aaKnown RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 HLA-DQA1Q5Y7H0 255 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 BICRALQ6AI39 1079 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 RTL6Q6ICC9 239 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 ZNF585AQ6P3V2 769 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 GDF7Q7Z4P5 450 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 CCDC71Q8IV32 467 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 SLC22A9Q8IVM8 553 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 ADCY4Q8NFM4 1077 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 LILRB4Q8NHJ6 448 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 SPPL2AQ8TCT8 520 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 CTHRC1Q96CG8 243 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 CNRIP1Q96F85 164 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 KCNA7Q96RP8 456 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 ACPTQ9BZG2 426 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 UCK2Q9BZX2 261 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 NXF5Q9H1B4 397 aaKnown RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 GSTO2Q9H4Y5 243 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 DCDC2Q9UHG0 476 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 BOKQ9UMX3 212 aaPredicted RBP16.53■□□□□ 0.24
HMGN1-219ENST00000491183 TIMM22Q9Y584 194 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 HCFC1P51610 2035 aa16.53■□□□□ 0.24
HMGN1-219ENST00000491183 GOLGA6L10A6NI86 522 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 CAPN14A8MX76 684 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 G3V2L1 256 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 UBFD1O14562 309 aaKnown RBP16.52■□□□□ 0.24
HMGN1-219ENST00000491183 HCN1O60741 890 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ULK1O75385 1050 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ACVR2AP27037 513 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 HMOX2P30519 316 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 ALDH9A1P49189 494 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 HMGCS1Q01581 520 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 EXOSC7Q15024 291 aaKnown RBP16.52■□□□□ 0.24
HMGN1-219ENST00000491183 VWA5B2Q8N398 1253 aa16.52■□□□□ 0.24
HMGN1-219ENST00000491183 C17orf47Q8NEP4 570 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms