RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SUMF1Q8NBK3 374 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 NEK11Q8NG66 645 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 OR52K2Q8NGK3 314 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 RHOXF1Q8NHV9 184 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 UBTD2Q8WUN7 234 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 CXorf58Q96LI9 332 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 TXN2Q99757 166 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 NUSAP1Q9BXS6 441 aaKnown RBP3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 HSD3B7Q9H2F3 369 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 RWDD1Q9H446 243 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 DPEP3Q9H4B8 488 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 ZCCHC3Q9NUD5 404 aaKnown RBP3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 GPR83Q9NYM4 423 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 SPATA2Q9UM82 520 aa3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 MRPL11Q9Y3B7 192 aaKnown RBP3.86□□□□□ -1.79
HMGB1P38-201ENST00000490557 GPR89AB7ZAQ6 455 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 STBD1O95210 358 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 GPR89BP0CG08 455 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 TOP1P11387 765 aaKnown RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 HSD17B1P14061 328 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 GP9P14770 177 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 ARF4P18085 180 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 PPP2R1BP30154 601 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 ADSSP30520 456 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CAMLGP49069 296 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CASP9P55211 416 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 ADARP55265 1226 aaKnown RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 RPL27P61353 136 aaKnown RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 EMC2Q15006 297 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 PDK1Q15118 436 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CNPY1Q3B7I2 92 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CCDC40Q4G0X9 1142 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 AARDQ4LEZ3 155 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 DCAF12Q5T6F0 453 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 C12orf60Q5U649 245 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 ARMCX5Q6P1M9 558 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 ISLR2Q6UXK2 745 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 RUFY3Q7L099 469 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 PRSS42Q7Z5A4 293 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CEACAM19Q7Z692 300 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 NBPF5PQ86XG9 351 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 HPS6Q86YV9 775 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 CNTN4Q8IWV2 1026 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 SPAG16Q8N0X2 631 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 OR6M1Q8NGM8 313 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 SLC13A3Q8WWT9 602 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 EPSTI1Q96J88 318 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 NTMT1Q9BV86 223 aa3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 RPH3AQ9Y2J0 694 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P38-201ENST00000490557 SGK1O00141 431 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 VEGFDO43915 354 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 FRAT2O75474 233 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 AKAP3O75969 853 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 KIAA0754O94854 1291 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 RENP00797 406 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 ALPPP05187 535 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 SFTPBP07988 381 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 MELTFP08582 738 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 ALPPL2P10696 532 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 B4GALT1P15291 398 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 TMOD1P28289 359 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 BRCC3P46736 316 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 CSRP3P50461 194 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 KIAA1024LP59773 190 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 CDKL1Q00532 357 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 CRMP1Q14194 572 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 P2RY14Q15391 338 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 SGCBQ16585 318 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 HFEQ30201 348 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 VWA2Q5GFL6 755 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 RTL6Q6ICC9 239 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 TOM1L2Q6ZVM7 507 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 EGFL6Q8IUX8 553 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 FBXW8Q8N3Y1 598 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 SIDT2Q8NBJ9 832 aaKnown RBP3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 OR1K1Q8NGR3 316 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 FBXO25Q8TCJ0 367 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 ST7LQ8TDW4 575 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 GLYATL1Q969I3 302 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 GANQ9H2C0 597 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 DCLRE1BQ9H816 532 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 SLC35D1Q9NTN3 355 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 COX16Q9P0S2 106 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 PCSK1NQ9UHG2 260 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 FOXA2Q9Y261 457 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 CLCA3PQ9Y6N3 262 aa3.84□□□□□ -1.79
HMGB1P38-201ENST00000490557 NOTCH3Q9UM47 2321 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 YJEFN3A6XGL0 299 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 RNF212BA8MTL3 300 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 SRRM5B3KS81 715 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 H0YCG3 227 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 BOLA2-SMG1P6H3BVE0 249 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 BCL2L11O43521 198 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCDC192P0DO97 292 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 PRG2P13727 222 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCNCP24863 283 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 ELK3P41970 407 aa3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 TRA2BP62995 288 aaKnown RBP3.83□□□□□ -1.8
HMGB1P38-201ENST00000490557 PRKCEQ02156 737 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms