RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IRX4P78413 519 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 IRX3P78415 501 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CCZ1BP86790 482 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CCZ1P86791 482 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 MYBPC1Q00872 1141 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 HSPA14Q0VDF9 509 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ILF2Q12905 390 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TRDNQ13061 729 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TRAF3Q13114 568 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 PDK3Q15120 406 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF284Q2VY69 593 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 LRIT3Q3SXY7 679 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TDRD12Q587J7 1177 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 LIPJQ5W064 366 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 FRG2Q64ET8 278 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 C16orf82Q7Z2V1 217 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 YRDCQ86U90 279 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 AMIGO1Q86WK6 493 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF34Q8IZ26 560 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 DSELQ8IZU8 1212 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM123Q8N131 208 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 LRRC75A-AS1Q8N1F1 130 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TEX45Q8NA69 505 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 KCNH5Q8NCM2 988 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 DNAJA4Q8WW22 397 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 P3H4Q92791 437 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 GLYATL1Q969I3 302 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 EFHD2Q96C19 240 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 C11orf24Q96F05 449 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 THOC1Q96FV9 657 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 BTBD10Q9BSF8 475 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NUP58Q9BVL2 599 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 LRRCC1Q9C099 1032 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TRPV6Q9H1D0 765 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 RIMS4Q9H426 269 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 XKR8Q9H6D3 395 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 HAUS4Q9H6D7 363 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 PELI2Q9HAT8 420 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ACKR4Q9NPB9 350 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NOX4Q9NPH5 578 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM51Q9NW97 253 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 FBXL2Q9UKC9 423 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 KLHDC2Q9Y2U9 406 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NSG2Q9Y328 171 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 LOXL2Q9Y4K0 774 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 RAI2Q9Y5P3 530 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 THSD7AQ9UPZ6 1657 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 MAP2P11137 1827 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CDK12Q9NYV4 1490 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 INSRP06213 1382 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM208AQ9UK61 1670 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TEX13DA0A0J9YY54 714 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MBLAC1A4D2B0 266 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ACOD1A6NK06 481 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 A8MUI8 341 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 E9PI62 339 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 HAS3O00219 553 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 HSPA12AO43301 675 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF254O75437 659 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PRKRAO75569 313 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RHOBTB1O94844 696 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF432O94892 652 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 GAS8O95995 478 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 OTCP00480 354 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 HPRP00739 348 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CSTAP01040 98 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 IGKV3-20P01619 116 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RALBP11234 206 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MYL6BP14649 208 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TNNI3P19429 210 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 GNLYP22749 145 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 HNRNPH3P31942 346 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CHI3L1P36222 383 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 THOP1P52888 689 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CRYBB1P53674 252 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CDH12P55289 794 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CLDN8P56748 225 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 BRWD1-AS2P59051 145 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 B3GALT5-AS1P59052 145 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ERVFC1-1P60608 527 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RPS8P62241 208 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 BDH1Q02338 343 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 IRF8Q02556 426 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 EEF1A2Q05639 463 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 FOXM1Q08050 763 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 IL10RBQ08334 325 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PJVKQ0ZLH3 352 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ZBTB17Q13105 803 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ILKQ13418 452 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 NFATC2Q13469 925 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 LINC01620Q4KN68 170 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PIP5KL1Q5T9C9 394 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 IL23RQ5VWK5 629 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 C9orf57Q5W0N0 161 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 NIPAL3Q6P499 406 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 SHFQ7M4L6 423 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TRMT11Q7Z4G4 463 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 DEFB132Q7Z7B7 95 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 FJX1Q86VR8 437 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms