RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CMTM5Q96DZ9 223 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 TSSK3Q96PN8 268 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 PSMG3-AS1Q96PY0 264 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 SERINC2Q96SA4 455 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 ROGDIQ9GZN7 287 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 COPS7BQ9H9Q2 264 aaPredicted RBP9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 MYNNQ9NPC7 610 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 OLAHQ9NV23 265 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 MRPS33Q9Y291 106 aaKnown RBP9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 ATG4BQ9Y4P1 393 aa9.85□□□□□ -0.83
SCAMP4-208ENST00000489554 A0A1W2PR48 441 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ASPDHA6ND91 283 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SAGE2PA6NJ88 616 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 C9JVG2 144 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ANKRD65E5RJM6 399 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 FAM227AF5H4B4 570 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SEMA7AO75326 666 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 PRKRAO75569 313 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 F10P00742 488 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CRYABP02511 175 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 IL3P08700 152 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 FAM58BPP0C7Q3 252 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 GP1BBP13224 206 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 NCF2P19878 526 aaPredicted RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 MAOAP21397 527 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 LIM2P55344 173 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 NME5P56597 212 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CLDN8P56748 225 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 HSD17B7P56937 341 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 TRA2BP62995 288 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ZNF763Q0D2J5 394 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 KLF10Q13118 480 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SQLEQ14534 574 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 MPEG1Q2M385 716 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 DNAL1Q4LDG9 190 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ZNF385BQ569K4 471 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CCNYL2Q5T2Q4 361 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 PAGE2Q7Z2X7 111 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SCUBE1Q8IWY4 988 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ZNF595Q8IYB9 648 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 BEST3Q8N1M1 668 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 TMEM52Q8NDY8 209 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ELP5Q8TE02 316 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CSF3RQ99062 836 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SLX1AQ9BQ83 275 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 UTP23Q9BRU9 249 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 BTBD10Q9BSF8 475 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 C1orf21Q9H246 121 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 NECTIN3Q9NQS3 549 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 PRTFDC1Q9NRG1 225 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 AHSPQ9NZD4 102 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ZIM2Q9NZV7 527 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 TAGLN3Q9UI15 199 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 DAPP1Q9UN19 280 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 EIF3LQ9Y262 564 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 SLC5A6Q9Y289 635 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 PCDHGB6Q9Y5F9 930 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CLDN16Q9Y5I7 305 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 CNTRLQ7Z7A1 2325 aa9.84□□□□□ -0.83
SCAMP4-208ENST00000489554 ESPL1Q14674 2120 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 DOPEY2Q9Y3R5 2298 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 GNG14A0A1W2PPG7 69 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 WASHC1A8K0Z3 465 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 CYR61O00622 381 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 SCAMP2O15127 329 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 GYG2O15488 501 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 PROM1O43490 865 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 TBX19O60806 448 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 RASAL1O95294 804 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 AIFM1O95831 613 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 T-ENOLP0DO92 83 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 CAPN3P20807 821 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 PIK3R1P27986 724 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 MAPK1P28482 360 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 HNRNPFP52597 415 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 MAPK12P53778 367 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 PHC1P78364 1004 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 SLC13A2Q13183 592 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 SLAMF1Q13291 335 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 TUBA3CQ13748 450 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 RCAN2Q14206 197 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF766Q5HY98 468 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 C18orf63Q68DL7 685 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF324BQ6AW86 544 aaPredicted RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 FCRLBQ6BAA4 426 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 TUBA3EQ6PEY2 450 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 GK5Q6ZS86 529 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 CAMKMTQ7Z624 323 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 RPS19BP1Q86WX3 136 aaKnown RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 MIER2Q8N344 545 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 HORMAD2Q8N7B1 307 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 AMER2Q8N7J2 671 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 DNAJB8Q8NHS0 232 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 NR4A3Q92570 626 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 ZNF764Q96H86 408 aaPredicted RBP9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 C5orf34Q96MH7 638 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 TAAR6Q96RI8 345 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 CENPKQ9BS16 269 aa9.83□□□□□ -0.84
SCAMP4-208ENST00000489554 LYRM4Q9HD34 91 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms