RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 KIFC1Q9BW19 673 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 WWTR1Q9GZV5 400 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 IL22Q9GZX6 179 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 FBXO6Q9NRD1 293 aaPredicted RBP8.28□□□□□ -1.08
SSBP1-212ENST00000489378 SYBUQ9NX95 663 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
SSBP1-212ENST00000489378 TP53I11O14683 189 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 HCRTR2O43614 444 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 SSX4O60224 188 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 OR10H2O60403 315 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 TBX6O95947 436 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 IFNB1P01574 187 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 MGAT1P26572 445 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 DPP4P27487 766 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 CASP3P42574 277 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 LHX2P50458 406 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 RWDD2BP57060 319 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 LOXL1Q08397 574 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 FUT7Q11130 342 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 GPS1Q13098 491 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 KLF1Q13351 362 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 RPS6KA2Q15349 733 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 KBTBD12Q3ZCT8 623 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 DUPD1Q68J44 220 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 CYB5R2Q6BCY4 276 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF470Q6ECI4 717 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 NEPROQ6NW34 567 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 NXPE4Q6UWF7 544 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 ENPP6Q6UWR7 440 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 ANGPTL8Q6UXH0 198 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 P4HA3Q7Z4N8 544 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 TMPRSS11BQ86T26 416 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 WFDC8Q8IUA0 241 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 DENND6AQ8IWF6 608 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 OR10H5Q8NGA6 315 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 SMAP2Q8WU79 429 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 CCT6BQ92526 530 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 NEUROG1Q92886 237 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 TMEM41AQ96HV5 264 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF845Q96IR2 970 aaPredicted RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 HS6ST2Q96MM7 605 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 SERINC2Q96SA4 455 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 CHODLQ9H9P2 273 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 PELI2Q9HAT8 420 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 INTS10Q9NVR2 710 aaKnown RBP8.27□□□□□ -1.09
SSBP1-212ENST00000489378 ARL15Q9NXU5 204 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 NBEAL2Q6ZNJ1 2754 aa8.27□□□□□ -1.09
SSBP1-212ENST00000489378 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 GOLGA6L9A6NEM1 432 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SERINC4A6NH21 518 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 BTNL10A8MVZ5 291 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 FGF17O60258 216 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 PTMAP06454 111 aaKnown RBP8.26□□□□□ -1.09
SSBP1-212ENST00000489378 COX7A2P14406 83 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 ITGA2P17301 1181 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 GCKP35557 465 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 CETN2P41208 172 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 STT3AP46977 705 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 NPY2RP49146 381 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 GFRA1P56159 465 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 CLDN18P56856 261 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 TIAL1Q01085 375 aaKnown RBP eCLIP8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SP140Q13342 867 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 EBPQ15125 230 aaKnown RBP8.26□□□□□ -1.09
SSBP1-212ENST00000489378 EXOC3L2Q2M3D2 409 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 ADAM5Q6NVV9 412 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SCIMPQ6UWF3 145 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SLC29A4Q7RTT9 530 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 OR14L1PQ8NHC6 308 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SGMS2Q8NHU3 365 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 RDH11Q8TC12 318 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 FBXW5Q969U6 566 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 REPS1Q96D71 796 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 FBXL20Q96IG2 436 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 DGAT2Q96PD7 388 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 MAPKAP1Q9BPZ7 522 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 CCDC68Q9H2F9 335 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 WWOXQ9NZC7 414 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 BFARQ9NZS9 450 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 RNF112Q9ULX5 631 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 DLGAP4Q9Y2H0 992 aa8.26□□□□□ -1.09
SSBP1-212ENST00000489378 A0A088AWK7 358 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 SLC22A20A6NK97 555 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 CD8AP01732 235 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 CLPSP04118 112 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 HIST1H2AGP0C0S8 130 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ZSCAN5DPP0CG00 497 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 CD8BP10966 210 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF708P17019 499 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 HIST1H2ADP20671 130 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ZNF10P21506 573 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 MAGEA1P43355 309 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 HERVK_113P63132 956 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 ERVK-8P63133 956 aa8.25□□□□□ -1.09
SSBP1-212ENST00000489378 IGLV3-21P80748 117 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-212ENST00000489378 DEFA6Q01524 100 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms