RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FIG4Q92562 907 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CSF3RQ99062 836 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 PKP2Q99959 881 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 PRRG4Q9BZD6 226 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CCDC68Q9H2F9 335 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 RNF122Q9H9V4 155 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 PLSCR4Q9NRQ2 329 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 SNX15Q9NRS6 342 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CBLN4Q9NTU7 201 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 ARL15Q9NXU5 204 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 MAD1L1Q9Y6D9 718 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 C2orf92A0A1B0GVN3 265 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 ERI2A8K979 691 aaKnown RBP10.32□□□□□ -0.76
HDAC6-233ENST00000489352 BTNL10A8MVZ5 291 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 E7EVH7 732 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 NDUFS8O00217 210 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 SMAD9O15198 467 aaKnown RBP10.32□□□□□ -0.76
HDAC6-233ENST00000489352 IGKV3-11P04433 115 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 NR4A2P43354 598 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 EFNA4P52798 201 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 PLA2G16P53816 162 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 BCL2A1Q16548 175 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 CTU2Q2VPK5 515 aaKnown RBP10.32□□□□□ -0.76
HDAC6-233ENST00000489352 SLC30A6Q6NXT4 461 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 TRIM40Q6P9F5 258 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 KATNAL2Q8IYT4 538 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 FBXL14Q8N1E6 418 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 FAM71DQ8N9W8 422 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 HSD17B8Q92506 261 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 LPGAT1Q92604 370 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 S100PBPQ96BU1 408 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 FBXL20Q96IG2 436 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 SERINC2Q96SA4 455 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 TCF12Q99081 682 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 HDHD5Q9BXW7 423 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 OR2B2Q9GZK3 357 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 STMN4Q9H169 189 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-233ENST00000489352 CHRAC1Q9NRG0 131 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 MED29Q9NX70 200 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 KLRF1Q9NZS2 232 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 WHRNQ9P202 907 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 DAPP1Q9UN19 280 aa10.32□□□□□ -0.76
HDAC6-233ENST00000489352 EXO1Q9UQ84 846 aaKnown RBP10.32□□□□□ -0.76
HDAC6-233ENST00000489352 OR6C76A6NM76 312 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 RAMP1O60894 148 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 TNFRSF21O75509 655 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
HDAC6-233ENST00000489352 FCGR2AP12318 317 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PEPDP12955 493 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 TCEA1P23193 301 aaKnown RBP10.31□□□□□ -0.76
HDAC6-233ENST00000489352 IL32P24001 234 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 ADH6P28332 368 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 STT3AP46977 705 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 CLCN7P51798 805 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 RPS13P62277 151 aaKnown RBP10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PLIN5Q00G26 463 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 BIKQ13323 160 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PON3Q15166 354 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 SHQ1Q6PI26 577 aaKnown RBP10.31□□□□□ -0.76
HDAC6-233ENST00000489352 MBOAT1Q6ZNC8 495 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF619Q8N2I2 560 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 NUP43Q8NFH3 380 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 OR6K3Q8NGY3 331 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 FNDC9Q8TBE3 224 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 SLC5A11Q8WWX8 675 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 NEIL2Q969S2 332 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PPWD1Q96BP3 646 aaKnown RBP10.31□□□□□ -0.76
HDAC6-233ENST00000489352 TSNARE1Q96NA8 513 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 SPNS1Q9H2V7 528 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 DKKL1Q9UK85 242 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 POU2F3Q9UKI9 436 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PDE10AQ9Y233 779 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 DYRK1BQ9Y463 629 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PMF1-BGLAPU3KQ54 211 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 PLCE1Q9P212 2302 aa10.31□□□□□ -0.76
HDAC6-233ENST00000489352 HRKO00198 91 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ICOSLGO75144 302 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 VAPBO95292 243 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 C8GP07360 202 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF23P17027 643 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 PSMB1P20618 241 aaKnown RBP10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
HDAC6-233ENST00000489352 CERS1P27544 350 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 TTKP33981 857 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 HILS1P60008 231 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 HERVK_113P63132 956 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ERVK-8P63133 956 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 IRF9Q00978 393 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF844Q08AG5 666 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF267Q14586 743 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-233ENST00000489352 EBPQ15125 230 aaKnown RBP10.3□□□□□ -0.76
HDAC6-233ENST00000489352 SGCBQ16585 318 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 PCID2Q5JVF3 399 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 DUPD1Q68J44 220 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 CYHR1Q6ZMK1 362 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 PIWIL4Q7Z3Z4 852 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms