RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MRPS18CQ9Y3D5 142 aaKnown RBP3.64□□□□□ -1.83
XRN1-213ENST00000489241 CSNK1G3Q9Y6M4 447 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 ZHX2Q9Y6X8 837 aa3.64□□□□□ -1.83
XRN1-213ENST00000489241 KDRP35968 1356 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 PARD3Q8TEW0 1356 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 GPR89AB7ZAQ6 455 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 G3V2L1 256 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 NR5A2O00482 541 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 MPHOSPH10O00566 681 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 E2F3O00716 465 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 MAPK13O15264 365 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 MTRF1O75570 445 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 GOT2P00505 430 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 GPR89BP0CG08 455 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 TNNI3P19429 210 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 DRD5P21918 477 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 HNRNPA2B1P22626 353 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 PSMA5P28066 241 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ID1P41134 155 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SLC1A6P48664 564 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SGSHP51688 502 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ATP12AP54707 1039 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ABCE1P61221 599 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 SNRPD1P62314 119 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 GCKRQ14397 625 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SGSM1Q2NKQ1 1148 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 HKDC1Q2TB90 917 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 NCR3LG1Q68D85 454 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 RGS9BPQ6ZS82 235 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 PAQR9Q6ZVX9 377 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 LHFPL4Q7Z7J7 247 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 TMEM110Q86TL2 294 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ARFGAP2Q8N6H7 521 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 STKLD1Q8NE28 680 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 GIPC3Q8TF64 312 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SLCO2A1Q92959 643 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SLC25A36Q96CQ1 311 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 TESK2Q96S53 571 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 CLEC7AQ9BXN2 247 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 RMND5AQ9H871 391 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 WDR76Q9H967 626 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 CALHM2Q9HA72 323 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 KCNK13Q9HB14 408 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 IL1RAPQ9NPH3 570 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 SCRT2Q9NQ03 307 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 ATAD3AQ9NVI7 634 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 NLGN3Q9NZ94 848 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 TMEM181Q9P2C4 612 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 EXTL2Q9UBQ6 330 aa3.63□□□□□ -1.83
XRN1-213ENST00000489241 MRPS28Q9Y2Q9 187 aaKnown RBP3.63□□□□□ -1.83
XRN1-213ENST00000489241 A0A087X002 238 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 IGHV3-20A0A0C4DH32 117 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 MEIOCA2RUB1 952 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 K7EQD1 137 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 SDHDO14521 159 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 MCF2LO15068 1137 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 INPP4BO15327 924 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 SPAG6O75602 509 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 NXPH4O95158 308 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 ASNSP08243 561 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 CLUP10909 449 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 ZNF26P17031 533 aaPredicted RBP3.62□□□□□ -1.83
XRN1-213ENST00000489241 MMP12P39900 470 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 TRIP10Q15642 601 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 HAGHQ16775 308 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 PARP6Q2NL67 630 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 HLA-BQ31612 363 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 TCHHL1Q5QJ38 904 aaPredicted RBP3.62□□□□□ -1.83
XRN1-213ENST00000489241 DDI2Q5TDH0 399 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 RHBDD2Q6NTF9 364 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 SLC39A4Q6P5W5 647 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 LRRC8BQ6P9F7 803 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 GPBP1Q86WP2 473 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 TBC1D10CQ8IV04 446 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 ZDHHC21Q8IVQ6 265 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 FAM133AQ8N9E0 248 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 OR52M1Q8NGK5 317 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 OR4F5Q8NH21 305 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 SLC5A11Q8WWX8 675 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 ALKBH3Q96Q83 286 aaPredicted RBP3.62□□□□□ -1.83
XRN1-213ENST00000489241 TMEM117Q9H0C3 514 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 TSPY26PQ9H489 355 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 NMUR1Q9HB89 426 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 FARSBQ9NSD9 589 aaKnown RBP3.62□□□□□ -1.83
XRN1-213ENST00000489241 PLCXD1Q9NUJ7 323 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 GDAP2Q9NXN4 497 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 RDH8Q9NYR8 311 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 BAIAP2L1Q9UHR4 511 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 ATP6V1HQ9UI12 483 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 B9D1Q9UPM9 204 aa3.62□□□□□ -1.83
XRN1-213ENST00000489241 SYNJ2BP-COX16A0A087WUM0 186 aa3.61□□□□□ -1.83
XRN1-213ENST00000489241 IQCMA0A1B0GVH7 501 aa3.61□□□□□ -1.83
XRN1-213ENST00000489241 CLRN2A0PK11 232 aa3.61□□□□□ -1.83
XRN1-213ENST00000489241 TRIM64CA6NLI5 447 aa3.61□□□□□ -1.83
XRN1-213ENST00000489241 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
XRN1-213ENST00000489241 TMCO5BA8MYB1 307 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms