RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 GLRA3O75311 464 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 ULK1O75385 1050 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 PROCP04070 461 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 IL3P08700 152 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 KRT15P19012 456 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 FUT7Q11130 342 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 DUSP8Q13202 625 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 EMC4Q5J8M3 183 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 HLA-DQA1Q5Y7H0 255 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 ARHGAP11AQ6P4F7 1023 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 XKRXQ6PP77 449 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 ZYG11AQ6WRX3 759 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 C4orf33Q8N1A6 199 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 FBXW8Q8N3Y1 598 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 FAM109AQ8N4B1 249 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SLC15A4Q8N697 577 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 OR2W6PQ8NHA6 318 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 PAQR8Q8TEZ7 354 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 CHTF18Q8WVB6 975 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SDCCAG3Q96C92 435 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SMC6Q96SB8 1091 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 SHCBP1LQ9BZQ2 653 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 L2HGDHQ9H9P8 463 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 PFDN4Q9NQP4 134 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 PNPLA3Q9NST1 481 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 DCDC2Q9UHG0 476 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 KLF2Q9Y5W3 355 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 LRBAP50851 2863 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 GNG14A0A1W2PPG7 69 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 LRRC3CA6NJW4 275 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 GUCY1B2O75343 617 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 NME6O75414 186 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 ENO1P06733 434 aaKnown RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 S1PR1P21453 382 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 GPX3P22352 226 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 SERPINB3P29508 390 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 SOX18P35713 384 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 MRPS35P82673 323 aaKnown RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 MGAT2Q10469 447 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 DESI1Q6ICB0 168 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 TAGAPQ8N103 731 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 CCDC63Q8NA47 563 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 CDC26Q8NHZ8 85 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 ADIPOR1Q96A54 375 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 EXOSC8Q96B26 276 aaKnown RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 NXF5Q9H1B4 397 aaKnown RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 SLC6A15Q9H2J7 730 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 EXO5Q9H790 373 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 TNFRSF12AQ9NP84 129 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 MAT2BQ9NZL9 334 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 UTS2RQ9UKP6 389 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
VTI1A-206ENST00000489142 DLGAP4Q9Y2H0 992 aa12.89□□□□□ -0.35
VTI1A-206ENST00000489142 PLIN3O60664 434 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 CLDN14O95500 239 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 HSD3B1P14060 373 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 PCSK2P16519 638 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 CSNK2A2P19784 350 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-206ENST00000489142 HSD3B2P26439 372 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 TNFRSF8P28908 595 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 NAGLUP54802 743 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 PKNOX1P55347 436 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ACSM2AQ08AH3 577 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 NTRK2Q16620 822 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
VTI1A-206ENST00000489142 SPDYAQ5MJ70 313 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ACSM2BQ68CK6 577 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF585AQ6P3V2 769 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 MCEMP1Q8IX19 187 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 C16orf78Q8WTQ4 265 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 PHF10Q8WUB8 498 aaKnown RBP12.88□□□□□ -0.35
VTI1A-206ENST00000489142 DIO2Q92813 273 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF681Q96N22 645 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 DOHHQ9BU89 302 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ITPAQ9BY32 194 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 TP63Q9H3D4 680 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-206ENST00000489142 ZNF703Q9H7S9 590 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-206ENST00000489142 EHD3Q9NZN3 535 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 SPRR3Q9UBC9 169 aa12.88□□□□□ -0.35
VTI1A-206ENST00000489142 MCM8Q9UJA3 840 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms