RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TNPO3Q9Y5L0 923 aaKnown RBP16.88■□□□□ 0.29
HDAC6-231ENST00000488905 NPFFR2Q9Y5X5 522 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 IKBKGQ9Y6K9 419 aa16.88■□□□□ 0.29
HDAC6-231ENST00000488905 A0A096LPK6 155 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 AHRRA9YTQ3 701 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 SYT5O00445 386 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 PGRMC2O15173 223 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 DIAPH2O60879 1101 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 EPPINO95925 133 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 PIK3R1P27986 724 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 CEACAM8P31997 349 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-231ENST00000488905 NRG3P56975 720 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 GUCY2DQ02846 1103 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 FUT7Q11130 342 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 FBXL19-AS1Q494R0 122 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 FLYWCH1Q4VC44 716 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 FNDC7Q5VTL7 733 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 PM20D2Q8IYS1 436 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 SPPL2AQ8TCT8 520 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 RNASE6Q93091 150 aaKnown RBP16.87■□□□□ 0.29
HDAC6-231ENST00000488905 MRRFQ96E11 262 aaKnown RBP16.87■□□□□ 0.29
HDAC6-231ENST00000488905 HSPBAP1Q96EW2 488 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 LRRC46Q96FV0 321 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 GPR78Q96P69 363 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 CDK15Q96Q40 435 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 SERPINI1Q99574 410 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 TIMP4Q99727 224 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 TMUB1Q9BVT8 246 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 PRDM14Q9GZV8 571 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 OR10A5Q9H207 317 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 RASSF1Q9NS23 344 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 C15orf41Q9Y2V0 281 aa16.87■□□□□ 0.29
HDAC6-231ENST00000488905 FAM221AA4D161 298 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 OR7A17O14581 309 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 TRAPPC6AO75865 159 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 SNX4O95219 450 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 CLDN9O95484 217 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 ALDOAP04075 364 aaKnown RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 HPNP05981 417 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 CD99P14209 185 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 TIMP3P35625 211 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 ARL1P40616 181 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 MASP1P48740 699 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 SERPINB8P50452 374 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 CDK9P50750 372 aaKnown RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 UAP1Q16222 522 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 KRTAP21-3Q3LHN1 58 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 TECRLQ5HYJ1 363 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 C6orf163Q5TEZ5 329 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 PACS2Q86VP3 889 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 MED12LQ86YW9 2145 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 ZNF615Q8N8J6 731 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 CHDHQ8NE62 594 aaPredicted RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 C17orf47Q8NEP4 570 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 OR52B6Q8NGF0 335 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 ADIPOR1Q96A54 375 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 ANGPTL4Q9BY76 406 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 LIME1Q9H400 295 aa16.86■□□□□ 0.29
HDAC6-231ENST00000488905 NOL11Q9H8H0 719 aaKnown RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
HDAC6-231ENST00000488905 A6NNC1 897 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 TYK2P29597 1187 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 CCNG1P51959 295 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 RPP38P78345 283 aaKnown RBP16.85■□□□□ 0.29
HDAC6-231ENST00000488905 CEBPEQ15744 281 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 POMZP3Q6PJE2 187 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 TGIF2LYQ8IUE0 185 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 PRR22Q8IZ63 422 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 PTGR2Q8N8N7 351 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-231ENST00000488905 OR4K14Q8NGD5 310 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 FAM222BQ8WU58 562 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 TMEM41AQ96HV5 264 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 GNRHR2Q96P88 292 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 ZNF629Q9UEG4 869 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-231ENST00000488905 FOXD3Q9UJU5 478 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-231ENST00000488905 CBLCQ9ULV8 474 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 DTX4Q9Y2E6 619 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 SLC6A5Q9Y345 797 aa16.85■□□□□ 0.29
HDAC6-231ENST00000488905 ACSL3O95573 720 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 IL2RAP01589 272 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 CPMP14384 443 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 NT5EP21589 574 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 GPX3P22352 226 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 TACR1P25103 407 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 ABCD3P28288 659 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 CASP3P42574 277 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 ZNF136P52737 540 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 SF3B4Q15427 424 aaKnown RBP eCLIP16.84■□□□□ 0.297e-10■■■■□ 26.1
HDAC6-231ENST00000488905 NHSL2Q5HYW2 709 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 DCST1Q5T197 706 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 NSUN5P2Q63ZY6 315 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 FRG2Q64ET8 278 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 VASNQ6EMK4 673 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 PAGE2Q7Z2X7 111 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 CDC20BQ86Y33 519 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 VWA5B2Q8N398 1253 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 OR7G1Q8NGA0 311 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 ATP6V1E2Q96A05 226 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 FRG2BQ96QU4 278 aa16.84■□□□□ 0.29
HDAC6-231ENST00000488905 MRPL1Q9BYD6 325 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms