RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PNPP00491 289 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 HMOX1P09601 288 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 CT45A8P0DMV1 189 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 CT45A9P0DMV2 189 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 UMPSP11172 480 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 B4GALT1P15291 398 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 FOSL2P15408 326 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 GAP43P17677 238 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 MAPK3P27361 379 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 HMGCLP35914 325 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 MTIF2P46199 727 aaKnown RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 SLC7A2P52569 658 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 GEMP55040 296 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 RIPK4P57078 832 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 GALK2Q01415 458 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 ACTN3Q08043 901 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 HSPA14Q0VDF9 509 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 NPRL3Q12980 569 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 RPA4Q13156 261 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 KRT31Q15323 416 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 SGCBQ16585 318 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 RNF212Q495C1 297 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 C14orf28Q4W4Y0 310 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 CT45A2Q5DJT8 189 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 RTL6Q6ICC9 239 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 PRSS42Q7Z5A4 293 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 NBPF5PQ86XG9 351 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 SLC22A18ASQ8N1D0 253 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 PARP8Q8N3A8 854 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 UBTD2Q8WUN7 234 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 ATP6V0A1Q93050 837 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 CNOT6LQ96LI5 555 aaKnown RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 SPAG8Q99932 426 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 DDX50Q9BQ39 737 aaKnown RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 CCDC94Q9BW85 323 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 RNF41Q9H4P4 317 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 MAGEF1Q9HAY2 307 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 IL1RL2Q9HB29 575 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 SLC25A19Q9HC21 320 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 TNFRSF19Q9NS68 423 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 ZCCHC3Q9NUD5 404 aaKnown RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 AKAP7Q9P0M2 348 aaPredicted RBP3.03□□□□□ -1.92
SSR1-209ENST00000488834 RNF24Q9Y225 148 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 IKBKGQ9Y6K9 419 aa3.03□□□□□ -1.92
SSR1-209ENST00000488834 KRT87PA6NCN2 255 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 ZSCAN5CA6NGD5 496 aaPredicted RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 YJEFN3A6XGL0 299 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 NDC80O14777 642 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 KERAO60938 352 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 HSF2BPO75031 334 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 STBD1O95210 358 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 MMP10P09238 476 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 SSR1P43307 286 aaKnown RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 YBEYP58557 167 aaPredicted RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 HMGN5P82970 282 aaKnown RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 CDKL1Q00532 357 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 STX1AQ16623 288 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 ANKRD55Q3KP44 614 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 MPPE1Q53F39 396 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 UNC50Q53HI1 259 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 LINC00242Q5T6M2 205 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 FHL5Q5TD97 284 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 RSBN1Q5VWQ0 802 aaPredicted RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 ZNF540Q8NDQ6 660 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 CHDHQ8NE62 594 aaPredicted RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 IPMKQ8NFU5 416 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 EEF2KMTQ96G04 330 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 FAM213AQ9BRX8 229 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 NTMT1Q9BV86 223 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 ZBP1Q9H171 429 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 TNMDQ9H2S6 317 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 THAP9Q9H5L6 903 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 AMBNQ9NP70 447 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 MID1IP1Q9NPA3 183 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 TECRQ9NZ01 308 aaKnown RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 RABL2AQ9UBK7 228 aaPredicted RBP3.02□□□□□ -1.93
SSR1-209ENST00000488834 B4GALT7Q9UBV7 327 aa3.02□□□□□ -1.93
SSR1-209ENST00000488834 SH3PXD2BA1X283 911 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 TRABD2BA6NFA1 517 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 DYNC1I1O14576 645 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 KINO60870 393 aaKnown RBP3.01□□□□□ -1.93
SSR1-209ENST00000488834 SEC22BO75396 215 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 SFTPBP07988 381 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 KRT13P13646 458 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 ZNF18P17022 549 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 AZU1P20160 251 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 FNTAP49354 379 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 GFPT1Q06210 699 aaPredicted RBP3.01□□□□□ -1.93
SSR1-209ENST00000488834 KLHL30Q0D2K2 578 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 ETFRF1Q6IPR1 90 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 APOOLQ6UXV4 268 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 ZNF600Q6ZNG1 722 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 CCDC73Q6ZRK6 1079 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 NAXDQ8IW45 347 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 SERPINA12Q8IW75 414 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 TBC1D21Q8IYX1 336 aa3.01□□□□□ -1.93
SSR1-209ENST00000488834 FBXW8Q8N3Y1 598 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms