RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 FKBP9O95302 570 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 AIFM1O95831 613 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 ZNF888P0CJ79 500 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-230ENST00000488543 CRATP43155 626 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 RELAQ04206 551 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 RGS1Q08116 209 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 DGCR6Q14129 220 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 C6orf132Q5T0Z8 1188 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 GCNT6Q5T4J0 391 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 SAXO2Q658L1 398 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 FRMPD2BQ6IN97 320 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 DCDC5Q6ZRR9 648 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 VTCN1Q7Z7D3 282 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 OR4N4Q8N0Y3 316 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 PSMA8Q8TAA3 256 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 POP5Q969H6 163 aaKnown RBP11.46□□□□□ -0.57
HDAC6-230ENST00000488543 FAIM2Q9BWQ8 316 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 CAPN10Q9HC96 672 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 ACSS1Q9NUB1 689 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-230ENST00000488543 CES1P1Q9UKY3 287 aa11.46□□□□□ -0.57
HDAC6-230ENST00000488543 SPTBP11277 2137 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 OCM2P0CE71 109 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 DDX5P17844 614 aaKnown RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 EPHA8P29322 1005 aaPredicted RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 CNR2P34972 360 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 CHI3L1P36222 383 aaPredicted RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 MAGEA2P43356 314 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 RAD23AP54725 363 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 MANFP55145 182 aaKnown RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 OR1D5P58170 312 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 BTN3A2P78410 334 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 FADDQ13158 208 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 MLC1Q15049 377 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 ZNF528Q3MIS6 628 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 PERM1Q5SV97 790 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 TMEM236Q5W0B7 351 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 C18orf63Q68DL7 685 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 CBLL1Q75N03 491 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 OOSP2Q86WS3 158 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 CROCCP3Q8IVE0 287 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 C11orf65Q8NCR3 313 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 NDNFQ8TB73 568 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 SAP25Q8TEE9 199 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 KLHL6Q8WZ60 621 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 FKBP10Q96AY3 582 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 NEURL3Q96EH8 262 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 GLIPR2Q9H4G4 154 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 SLC35C2Q9NQQ7 365 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 SELENONQ9NZV5 590 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 GMEB2Q9UKD1 530 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 FBXW2Q9UKT8 454 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 POMT2Q9UKY4 750 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 BAG5Q9UL15 447 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 SAMD4AQ9UPU9 718 aaKnown RBP11.46□□□□□ -0.58
HDAC6-230ENST00000488543 MAP4K5Q9Y4K4 846 aa11.46□□□□□ -0.58
HDAC6-230ENST00000488543 GLOD5A6NK44 160 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 RHPN2P1A8MT19 583 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 H0YGG7 62 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 KRT75O95678 551 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 CTSBP07858 339 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ST6GAL1P15907 406 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 GFERP55789 205 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ARF3P61204 181 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ISL1P61371 349 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 DUSP2Q05923 314 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 HSPB3Q12988 150 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 PEAR1Q5VY43 1037 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ANGPTL8Q6UXH0 198 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 EIF3MQ7L2H7 374 aaKnown RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 Q8N9G6 341 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 HDAC2Q92769 488 aaKnown RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ZBED6CLQ96FA7 236 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 AMDHD1Q96NU7 426 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 MAPKAP1Q9BPZ7 522 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ZFYVE21Q9BQ24 234 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 GTPBP2Q9BX10 602 aaKnown RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 NLNQ9BYT8 704 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 ARRDC1-AS1Q9H2J1 176 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 TMEM38AQ9H6F2 299 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 FAM60AQ9NP50 221 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 KLHL3Q9UH77 587 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 BCKDKO14874 412 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 PROM1O43490 865 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 CLPXO76031 633 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 PROS1P07225 676 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 SLC35G6P0C7Q6 338 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 JUNBP17275 347 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-230ENST00000488543 TTKP33981 857 aa11.45□□□□□ -0.58
HDAC6-230ENST00000488543 TMBIM6P55061 237 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms