RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 SLC7A5P2Q9GIP4 190 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 EMC7Q9NPA0 242 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 PTPRSQ13332 1948 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 A0A0A6YYJ9 748 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 AGAP14A8MT82 685 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SLC30A4O14863 429 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 HPGDSO60760 199 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 PSIP1O75475 530 aaKnown RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 IFNA16P05015 189 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 C1SP09871 688 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 CD22P20273 847 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 GSTM5P46439 218 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 C21orf58P58505 322 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 ERVFC1P60507 584 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 RAB14P61106 215 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SLC7A9P82251 487 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 FGFBP1Q14512 234 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SNAPC1Q16533 368 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 CRTC2Q53ET0 693 aaPredicted RBP13.48□□□□□ -0.25
RER1-207ENST00000488353 XKR6Q5GH73 641 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 CDKL4Q5MAI5 379 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 CASP12Q6UXS9 341 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 OR8J1Q8NGP2 316 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 MYLIPQ8WY64 445 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 UCN3Q969E3 161 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 SCRN2Q96FV2 425 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
RER1-207ENST00000488353 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 C8GP07360 202 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CHRM5P08912 532 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 ICAM2P13598 275 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 OSMP13725 252 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 RHCEP18577 417 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 SLC6A1P30531 599 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 IRS1P35568 1242 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 DGKEP52429 567 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 PFN3P60673 137 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ILKQ13418 452 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 MPPE1Q53F39 396 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CPTPQ5TA50 214 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ANGPTL8Q6UXH0 198 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 TM9SF4Q92544 642 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 WACQ9BTA9 647 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 ZNF282Q9UDV7 671 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 UBQLN2Q9UHD9 624 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 FKBP7Q9Y680 259 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ENPP4Q9Y6X5 453 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 TOR1AO14656 332 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 DHFRP00374 187 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ADAP00813 363 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 IFNA14P01570 189 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 GLULP15104 373 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 FEN1P39748 380 aaKnown RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 ATP12AP54707 1039 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 RBBP4Q09028 425 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 GAB1Q13480 694 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 EXOSC2Q13868 293 aaKnown RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 SCARB2Q14108 478 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CCDC85BQ15834 202 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 ANXA8L1Q5VT79 327 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ZNF770Q6IQ21 691 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 KIAA1324Q6UXG2 1013 aaKnown RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 TRILQ7L0X0 811 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 NPAS3Q8IXF0 933 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 SCAMP4Q969E2 229 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 VOPP1Q96AW1 172 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 MED8Q96G25 268 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 SUV39H2Q9H5I1 410 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
RER1-207ENST00000488353 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ZNF222Q9UK12 451 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 HCN2Q9UL51 889 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 ASB4Q9Y574 426 aa13.47□□□□□ -0.25
RER1-207ENST00000488353 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 DENND4CQ5VZ89 1909 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 PRAMEF33A0A0G2JMD5 474 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 OR2AG2A6NM03 316 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 E7EQ34 232 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 CASKO14936 926 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 SCAMP2O15127 329 aaKnown RBP13.46□□□□□ -0.25
RER1-207ENST00000488353 PRAMEF10O60809 474 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 ANXA3P12429 323 aa13.46□□□□□ -0.25
RER1-207ENST00000488353 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
RER1-207ENST00000488353 JUPP14923 745 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms