RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IGHV3-23P01764 117 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 CCDC166P0CW27 439 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 CT45A10P0DMU9 189 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 RPA1P27694 616 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 CCND3P30281 292 aaPredicted RBP2.39□□□□□ -2.03
SMC4-219ENST00000487747 OR1D4P47884 311 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 KYAT1Q16773 422 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 TAF3Q5VWG9 929 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 AQP12AQ8IXF9 295 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 CCDC191Q8NCU4 936 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 SETD6Q8TBK2 473 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 DNASE1L2Q92874 299 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 ZNF221Q9UK13 617 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 IGLV3-16A0A075B6K0 115 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 YDJCA8MPS7 323 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 MEI4A8MW99 385 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 PSMD3O43242 534 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 EPOP01588 193 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 ZP3P21754 424 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 ACP1P24666 158 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 CCNE1P24864 410 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 RBMXP38159 391 aaKnown RBP2.38□□□□□ -2.03
SMC4-219ENST00000487747 SLC7A2P52569 658 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 TOMM20Q15388 145 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 SPATA46Q5T0L3 261 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 IL34Q6ZMJ4 242 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 C4orf19Q8IY42 314 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 LSMEM1Q8N8F7 131 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 ACPTQ9BZG2 426 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 MIS18AQ9NYP9 233 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 NKIRAS2Q9NYR9 191 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 DPM3Q9P2X0 92 aa2.38□□□□□ -2.03
SMC4-219ENST00000487747 PTCH1Q13635 1447 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 ARHGEF37A1IGU5 675 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 SLC17A2O00624 439 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 CPNE6O95741 557 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 GABPAQ06546 454 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 C1orf189Q5VU69 101 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 ZNF691Q5VV52 312 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 CASC4Q6P4E1 433 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 LINC01555Q8NAE3 123 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 TFB1MQ8WVM0 346 aaKnown RBP2.37□□□□□ -2.03
SMC4-219ENST00000487747 CNDP2Q96KP4 475 aaKnown RBP2.37□□□□□ -2.03
SMC4-219ENST00000487747 C9orf85Q96MD7 179 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 PRAM1Q96QH2 718 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 S1PR3Q99500 378 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 TRIM9Q9C026 710 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 SLC2A6Q9UGQ3 507 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 CIDEBQ9UHD4 219 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 ANAPC5Q9UJX4 755 aa2.37□□□□□ -2.03
SMC4-219ENST00000487747 ERVV-1B6SEH8 477 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 TSPAN2O60636 221 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 WISP3O95389 354 aaPredicted RBP2.36□□□□□ -2.03
SMC4-219ENST00000487747 GSTA2P09210 222 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 KRT20P35900 424 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 MAGEB1P43366 347 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 ALDH3B2P48448 385 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 CAV2P51636 162 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 DCAF4L1Q3SXM0 396 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 GLYR1Q49A26 553 aaPredicted RBP2.36□□□□□ -2.03
SMC4-219ENST00000487747 STEAP1BQ6NZ63 245 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 ZNF589Q86UQ0 364 aaPredicted RBP2.36□□□□□ -2.03
SMC4-219ENST00000487747 FAM173AQ9BQD7 235 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 PFDN4Q9NQP4 134 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 RPH3AQ9Y2J0 694 aaPredicted RBP2.36□□□□□ -2.03
SMC4-219ENST00000487747 FLVCR1Q9Y5Y0 555 aa2.36□□□□□ -2.03
SMC4-219ENST00000487747 SIX3O95343 332 aaPredicted RBP2.35□□□□□ -2.03
SMC4-219ENST00000487747 TOP1P11387 765 aaKnown RBP2.35□□□□□ -2.03
SMC4-219ENST00000487747 HNRNPA2B1P22626 353 aaKnown RBP2.35□□□□□ -2.03
SMC4-219ENST00000487747 UCP2P55851 309 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 TEFQ10587 303 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 HEPACAMQ14CZ8 416 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 ACKR1Q16570 336 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 ZNF528Q3MIS6 628 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 DCLRE1AQ6PJP8 1040 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 MOB1BQ7L9L4 216 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 SYVN1Q86TM6 617 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 MARC2Q969Z3 335 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 ELOVL4Q9GZR5 314 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 EMCNQ9ULC0 261 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 ZNF175Q9Y473 711 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 ATG4BQ9Y4P1 393 aa2.35□□□□□ -2.03
SMC4-219ENST00000487747 A0A0A6YYD4 124 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 A0A1W2PQ67 120 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 TSPY3P0CV98 308 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 TSPY8P0CW00 308 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 B4GALT1P15291 398 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 ZNF44P15621 663 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 IGHV1-2P23083 117 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 IGFBP5P24593 272 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 SHHQ15465 462 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 PRR4Q16378 134 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 TWISTNBQ3B726 338 aaPredicted RBP2.34□□□□□ -2.03
SMC4-219ENST00000487747 MFSD7Q6UXD7 560 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 STOX1Q6ZVD7 989 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 DPH7Q9BTV6 452 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 GPR174Q9BXC1 333 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 EHD1Q9H4M9 534 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 SRD5A3Q9H8P0 318 aa2.34□□□□□ -2.03
SMC4-219ENST00000487747 ESM1Q9NQ30 184 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms