RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ATP5DP30049 168 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 STX2P32856 288 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SPRP35270 261 aaPredicted RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 GP5P40197 560 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 BDKRB1P46663 353 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PTH2RP49190 550 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ZNF84P51523 738 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 KPNA2P52292 529 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PMS2P54278 862 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 TUBB4BP68371 445 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ALKBH1Q13686 389 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FASTKQ14296 549 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SLMAPQ14BN4 828 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 C16orf72Q14CZ0 275 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 TMED2Q15363 201 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 UAP1Q16222 522 aaPredicted RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 COLEC12Q5KU26 742 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FAM45BPQ6NSW5 357 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 UGT3A1Q6NUS8 523 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 UNC5DQ6UXZ4 953 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FAM92BQ6ZTR7 304 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 TRMT10CQ7L0Y3 403 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PIWIL4Q7Z3Z4 852 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ARHGAP22Q7Z5H3 698 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 AMIGO1Q86WK6 493 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ENDOVQ8N8Q3 282 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 LINC01555Q8NAE3 123 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 AVL9Q8NBF6 648 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FLVCR1-AS1Q8TAF5 88 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FAM45AQ8TCE6 357 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 DENND1AQ8TEH3 1009 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SLC44A1Q8WWI5 657 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 CDKL2Q92772 493 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 VPS39Q96JC1 886 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 RITA1Q96K30 269 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 TGM7Q96PF1 710 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 CYTH2Q99418 400 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PKP4Q99569 1192 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 GPR22Q99680 433 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 RBBP8Q99708 897 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 MAP3K3Q99759 626 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 HGH1Q9BTY7 390 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 HDHD5Q9BXW7 423 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PARD6BQ9BYG5 372 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 RAB33BQ9H082 229 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SRMSQ9H3Y6 488 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 THAP1Q9NVV9 213 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 OCIAD1Q9NX40 245 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 NSMCE4AQ9NXX6 385 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 SPHK1Q9NYA1 384 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 EPHA6Q9UF33 1036 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 POLG2Q9UHN1 485 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 TRMT6Q9UJA5 497 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 CORO1CQ9ULV4 474 aaPredicted RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ICKQ9UPZ9 632 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 NEUROG3Q9Y4Z2 214 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 FN1P02751 2386 aaKnown RBP5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 MGAQ8IWI9 3026 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 PTPRBP23467 1997 aa5.89□□□□□ -1.47
RTFDC1-209ENST00000487211 ATRQ13535 2644 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 COL27A1Q8IZC6 1860 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 A0A087WUV0 522 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 A0A1W2PPV9 198 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 OR5K3A6NET4 321 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CDC7O00311 574 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 DUX1O43812 170 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 SHBGP04278 402 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ENO1P06733 434 aaKnown RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CHRM5P08912 532 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CBSLP0DN79 551 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 THRAP10827 490 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 FGF3P11487 239 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ENO3P13929 434 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ITIH1P19827 911 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PRPH2P23942 346 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PEBP1P30086 187 aaKnown RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PKLRP30613 574 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CCKBRP32239 447 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PHBP35232 272 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CBSP35520 551 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ETV5P41161 510 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CAPZBP47756 277 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CSRP3P50461 194 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 DLG1Q12959 904 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CLPPQ16740 277 aaPredicted RBP5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PHKG1Q16816 387 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 TTLL9Q3SXZ7 439 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 PRAMEF17Q5VTA0 474 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 LIPMQ5VYY2 423 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 IRGCQ6NXR0 463 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 NEK10Q6ZWH5 1172 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 CMC1Q7Z7K0 106 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 OR9A1PQ8NGU1 263 aa5.88□□□□□ -1.47
RTFDC1-209ENST00000487211 DCAKDQ8WVC6 231 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms