RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 WWTR1Q9GZV5 400 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
NEK4-204ENST00000487068 CXorf21Q9HAI6 301 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 MYNNQ9NPC7 610 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 TIMMDC1Q9NPL8 285 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 HEY2Q9UBP5 337 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 DNAJC15Q9Y5T4 150 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 ZNF407Q9C0G0 2248 aa9.47□□□□□ -0.89
NEK4-204ENST00000487068 HIVEP3Q5T1R4 2406 aa9.46□□□□□ -0.89
NEK4-204ENST00000487068 ATP6AP2A0A1C7CYW4 349 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 ENO4A6NNW6 628 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 KLRC4-KLRK1H3BQV0 150 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 TFECO14948 347 aaPredicted RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 NME2P1O60361 137 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PEX11AO75192 247 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 ATP6AP2O75787 350 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 AGFG2O95081 481 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 LRATO95237 230 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 IGKV3-11P04433 115 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 ATP1B1P05026 303 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 CT62P0C5K7 136 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 DDCP20711 480 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 NME2P22392 152 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 MAPK1P28482 360 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 GALNSP34059 522 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 RFC3P40938 356 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 SLC1A6P48664 564 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 TMED10P49755 219 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 MEOX1P50221 254 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 NR0B1P51843 470 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 NRG3P56975 720 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 SLC37A1P57057 533 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 ABCE1P61221 599 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 MRPS35P82673 323 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 ALDH6A1Q02252 535 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 PLGLB1Q02325 96 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 EXOSC7Q15024 291 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 EBPQ15125 230 aaKnown RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 FAM111BQ6SJ93 734 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 IKBIPQ70UQ0 350 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 SZRD1Q7Z422 152 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 TICAM1Q8IUC6 712 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 GPALPP1Q8IXQ4 340 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 CCDC116Q8IYX3 515 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 FNDC5Q8NAU1 212 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PSD4Q8NDX1 1056 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 OR5M3Q8NGP4 307 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 OR2T11Q8NH01 316 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 FAM76AQ8TAV0 307 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 NUBPLQ8TB37 319 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 NR4A3Q92570 626 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 SCMH1Q96GD3 660 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PPP3R2Q96LZ3 170 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 TAAR6Q96RI8 345 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 CCT7Q99832 543 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 C1orf50Q9BV19 199 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 OR10A5Q9H207 317 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 TUBB1Q9H4B7 451 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 TMBIM4Q9HC24 238 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 SLC35C2Q9NQQ7 365 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 MAT2BQ9NZL9 334 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PLEKHB1Q9UF11 243 aaPredicted RBP9.46□□□□□ -0.9
NEK4-204ENST00000487068 GIMAP2Q9UG22 337 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 CFL2Q9Y281 166 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 ARHGAP21Q5T5U3 1957 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 MYO7BQ6PIF6 2116 aa9.46□□□□□ -0.9
NEK4-204ENST00000487068 PRRC2CQ9Y520 2896 aaKnown RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 TMEM200CA6NKL6 621 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 G3V3Y1 287 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 ACOT7O00154 380 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 CDK2AP1O14519 115 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 AKAP10O43572 662 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 CDC40O60508 579 aaKnown RBP eCLIP9.45□□□□□ -0.9
NEK4-204ENST00000487068 P04436 131 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 JUNP05412 331 aaKnown RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 EDN3P14138 238 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 PCSK2P16519 638 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 SDC1P18827 310 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 GRK2P25098 689 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 MPIP34949 423 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 TRHRP34981 398 aaPredicted RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 GPC1P35052 558 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 HPCAL1P37235 193 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 NCBP2P52298 156 aaKnown RBP eCLIP9.45□□□□□ -0.9
NEK4-204ENST00000487068 DUSP2Q05923 314 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 ZNF155Q12901 538 aaPredicted RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 HSPB3Q12988 150 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 STX3Q13277 289 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 PRICKLE4Q2TBC4 344 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 EIF2S3LQ2VIR3 472 aaKnown RBP9.45□□□□□ -0.9
NEK4-204ENST00000487068 FHL5Q5TD97 284 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 GFRALQ6UXV0 394 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 RTL4Q6ZR62 310 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 FAM47EQ6ZV65 393 aa9.45□□□□□ -0.9
NEK4-204ENST00000487068 HDXQ7Z353 690 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms