RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	UBE2Q2	Q8WVN8	375 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TFG	Q92734	400 aa	Predicted RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	P3H4	Q92791	437 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ULK4	Q96C45	1275 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	DCUN1D1	Q96GG9	259 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	OXNAD1	Q96HP4	312 aa	Predicted RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	RBM41	Q96IZ5	413 aa	Known RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	GBP5	Q96PP8	586 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PKP4	Q99569	1192 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	COPS8	Q99627	209 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	OR52A5	Q9H2C5	316 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	MVB12B	Q9H7P6	319 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	DDX31	Q9H8H2	851 aa	Known RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	COG4	Q9H9E3	785 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	VPS37B	Q9H9H4	285 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FAM60A	Q9NP50	221 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	P4HTM	Q9NXG6	502 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	CRLS1	Q9UJA2	301 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	RAB21	Q9UL25	225 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PTRH2	Q9Y3E5	179 aa	Known RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ARL5A	Q9Y689	179 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	CACNA1C	Q13936	2221 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	SETD2	Q9BYW2	2564 aa	Predicted RBP	3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	DOCK7	Q96N67	2140 aa		3.76	□□□□□ -1.81
SNRNP40-205	ENST00000486941	IGLV3-16	A0A075B6K0	115 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	hCG_1818297	A0A087WSY0	165 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TRBV5-4	A0A0C4DH59	114 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941		F5H423	210 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941		H7C0S8	307 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	LIN7A	O14910	233 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	LRRTM2	O43300	516 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PSTPIP1	O43586	416 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	HCRTR1	O43613	425 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	SPOP	O43791	374 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	LDB3	O75112	727 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	AP2A2	O94973	939 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	S100B	P04271	92 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TPM3	P06753	285 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	UMOD	P07911	640 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TNNT1	P13805	278 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PVR	P15151	417 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TCEA1	P23193	301 aa	Known RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	MMP11	P24347	488 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ITGA3	P26006	1051 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ACADL	P28330	430 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PDHA2	P29803	388 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	SHMT2	P34897	504 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ADRA1A	P35348	466 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TSFM	P43897	325 aa	Known RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZNF140	P52738	457 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ARSF	P54793	590 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZP1	P60852	638 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	RHAG	Q02094	409 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PLOD1	Q02809	727 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PRKG2	Q13237	762 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	CBFB	Q13951	182 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZRSR2	Q15696	482 aa	Known RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZIC1	Q15915	447 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	SLC5A12	Q1EHB4	618 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	NKAIN1	Q4KMZ8	207 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	TFDP3	Q5H9I0	405 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	AGAP7P	Q5VUJ5	663 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ITPRIPL1	Q6GPH6	555 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	LUZP1	Q86V48	1076 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	KATNAL2	Q8IYT4	538 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	RCOR2	Q8IZ40	523 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	DNAJC22	Q8N4W6	341 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	OR52E1	Q8NGJ3	308 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FLVCR1-AS1	Q8TAF5	88 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PPP4R1	Q8TF05	950 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	NAT14	Q8WUY8	206 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FAR1	Q8WVX9	515 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	N4BP2L2	Q92802	583 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PMM1	Q92871	262 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	MOCOS	Q96EN8	888 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	CCDC42	Q96M95	316 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	AGAP4	Q96P64	663 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	PPP1R2P1	Q96PQ5	205 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	OR2A14	Q96R47	310 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FERMT1	Q9BQL6	677 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	MECR	Q9BV79	373 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FICD	Q9BVA6	458 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	C1QTNF4	Q9BXJ3	329 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	KRTAP4-4	Q9BYR3	166 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	GBA3	Q9H227	469 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	SLC26A1	Q9H2B4	701 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	FAM96A	Q9H5X1	160 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	XKR8	Q9H6D3	395 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	WDR54	Q9H977	334 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ARNT2	Q9HBZ2	717 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZBTB20	Q9HC78	741 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	ZNHIT6	Q9NWK9	470 aa	Known RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	OR6C2	Q9NZP2	312 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	IFNK	Q9P0W0	207 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	IFT80	Q9P2H3	777 aa	Predicted RBP	3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	POLG2	Q9UHN1	485 aa		3.75	□□□□□ -1.81
SNRNP40-205	ENST00000486941	RSPH14	Q9UHP6	348 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms