RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KIAA1211LQ6NV74 962 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 BHLHB9Q6PI77 547 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 FBXL6Q8N531 539 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 OR2L5Q8NG80 312 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 SUN3Q8TAQ9 357 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC7A13Q8TCU3 470 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 FAM131CQ96AQ9 280 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 Q96MT0 163 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 MYADMQ96S97 322 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 SPATA5L1Q9BVQ7 753 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 C1QTNF7Q9BXJ2 289 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 POLR2J3Q9H1A7 115 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 OR51E2Q9H255 320 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 KCNK12Q9HB15 430 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 PRDM8Q9NQV8 689 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 CCDC59Q9P031 241 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 ATG4BQ9Y4P1 393 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 A0A1W2PRQ8 180 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 M0R3H8 397 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 PGRMC2O15173 223 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 ENTPD6O75354 484 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 IGFBP1P08833 259 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 HSMCR30P0CW71 290 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 SOX9P48436 509 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 PIN1Q13526 163 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 AMER2Q8N7J2 671 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 ELSPBP1Q96BH3 223 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 MOAP1Q96BY2 351 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 CNRIP1Q96F85 164 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 OR5M11Q96RB7 305 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 IL4I1Q96RQ9 567 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 CDCA3Q99618 268 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 NXF2Q9GZY0 626 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 MKRN2Q9H000 416 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC9A8Q9Y2E8 581 aa16.96■□□□□ 0.31
PDLIM7-207ENST00000486828 LOC100506127A0A0U1RQW1 187 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 H3BN98 237 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 K7EQS6 105 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 DSCR3O14972 297 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 AIFM1O95831 613 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 CHRM4P08173 479 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 CDH3P22223 829 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 CMPK1P30085 196 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 FEN1P39748 380 aaKnown RBP16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 TNFRSF4P43489 277 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 PPP5CP53041 499 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 PRKAG1P54619 331 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 FUT5Q11128 374 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 TARDBPQ13148 414 aaKnown RBP eCLIP16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 GNA13Q14344 377 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 LRRC32Q14392 662 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 C19orf48Q6RUI8 117 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 SNX29P2Q8IUI4 249 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM145Q8NBT3 493 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 OR56A1Q8NGH5 318 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 WDR36Q8NI36 951 aaKnown RBP16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 MRPL38Q96DV4 380 aaKnown RBP16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 SCARF2Q96GP6 870 aaPredicted RBP16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 MGLLQ99685 303 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 SPHK1Q9NYA1 384 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 DOLKQ9UPQ8 538 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 ENTPD4Q9Y227 616 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 PCDHGA4Q9Y5G9 962 aa16.96■□□□□ 0.3
PDLIM7-207ENST00000486828 DOCK8Q8NF50 2099 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 BOLA2-SMG1P6H3BVE0 249 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 KDM1AO60341 852 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 NME6O75414 186 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 EPPINO95925 133 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 TP53P04637 393 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 HMGN2P05204 90 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 DBTP11182 482 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 CD40LGP29965 261 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 TSFMP43897 325 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 ALDH6A1Q02252 535 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 RELAQ04206 551 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 DUSP2Q05923 314 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 MED22Q15528 200 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 MEDAGQ5VYS4 303 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 PODNL1Q6PEZ8 512 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 PARM1Q6UWI2 310 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 CASP12Q6UXS9 341 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 OLIG3Q7RTU3 272 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 MFSD9Q8NBP5 474 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 SRFBP1Q8NEF9 429 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 OTUB1Q96FW1 271 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 FNDC11Q9BVV2 318 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 ROGDIQ9GZN7 287 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 KIR3DX1Q9H7L2 352 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 GIN1Q9NXP7 522 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 SCHIP1Q9P0W5 487 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 FBXW2Q9UKT8 454 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 CES1P1Q9UKY3 287 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 HEBP2Q9Y5Z4 205 aa16.95■□□□□ 0.3
PDLIM7-207ENST00000486828 LGI1O95970 557 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 DNTTP04053 509 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 ALPPL2P10696 532 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CERS1P27544 350 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 MAT2AP31153 395 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 PTGER1P34995 402 aa16.94■□□□□ 0.3
PDLIM7-207ENST00000486828 CD97P48960 835 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms