RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF724A8MTY0 619 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 OR9G9P0C7N8 305 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 GP9P14770 177 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 RPA1P27694 616 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 CCND2P30279 289 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 GABPB1Q06547 395 aaPredicted RBP3.75□□□□□ -1.81
SMC4-218ENST00000486711 HKDC1Q2TB90 917 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 HSP90AA5PQ58FG0 334 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 TCHHL1Q5QJ38 904 aaPredicted RBP3.75□□□□□ -1.81
SMC4-218ENST00000486711 C12orf60Q5U649 245 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 DOK6Q6PKX4 331 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ISLR2Q6UXK2 745 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 DPY19L2P2Q6ZN68 376 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ADGRD2Q7Z7M1 963 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ZNF781Q8N8C0 355 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 CHDHQ8NE62 594 aaPredicted RBP3.75□□□□□ -1.81
SMC4-218ENST00000486711 FAM71CQ8NEG0 241 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 PRSS33Q8NF86 280 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 DQX1Q8TE96 717 aaKnown RBP3.75□□□□□ -1.81
SMC4-218ENST00000486711 NABP1Q96AH0 204 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ACCSQ96QU6 501 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ATOH8Q96SQ7 321 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 NLNQ9BYT8 704 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 OCR1Q9BZK8 76 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 UBXN6Q9BZV1 441 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 TUBB1Q9H4B7 451 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 PANK3Q9H999 370 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 GTSE1Q9NYZ3 720 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 MIOXQ9UGB7 285 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 IL20RAQ9UHF4 553 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 RARRES3Q9UL19 164 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 MOB4Q9Y3A3 225 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ZNF175Q9Y473 711 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 ATG4BQ9Y4P1 393 aa3.75□□□□□ -1.81
SMC4-218ENST00000486711 MYH15Q9Y2K3 1946 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 RNF212BA8MTL3 300 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 PDGFBP01127 241 aaPredicted RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 DNAJB1P25685 340 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 PPP2R1BP30154 601 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 SPRP35270 261 aaPredicted RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 CD86P42081 329 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 SLC7A2P52569 658 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 HTD2P86397 168 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 MS4A2Q01362 244 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 SPP2Q13103 211 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 ENPP2Q13822 863 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 DPYSQ14117 519 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 LY6DQ14210 128 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 PDIA5Q14554 519 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 POM121L1PQ3SYA9 428 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 LDLRAP1Q5SW96 308 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 LIPKQ5VXJ0 399 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 RHBDD2Q6NTF9 364 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 METTL7BQ6UX53 244 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 UNC5DQ6UXZ4 953 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 NUFIP2Q7Z417 695 aaKnown RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 GOLGA7Q7Z5G4 137 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 SYVN1Q86TM6 617 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 LUZP1Q86V48 1076 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 VPS36Q86VN1 386 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 RANBP3LQ86VV4 465 aaPredicted RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 GPBP1Q86WP2 473 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 BEST4Q8NFU0 473 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 CHPT1Q8WUD6 406 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 CAPNS2Q96L46 248 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 ZNF597Q96LX8 424 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 TRIM15Q9C019 465 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 LIME1Q9H400 295 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 Q9HAA7 133 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 TAS2R3Q9NYW6 316 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 SEC14L4Q9UDX3 406 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 CIDEBQ9UHD4 219 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 ZNF490Q9ULM2 529 aaPredicted RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 AURKCQ9UQB9 309 aa3.74□□□□□ -1.81
SMC4-218ENST00000486711 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.74□□□□□ -1.81
SMC4-218ENST00000486711 KRTAP16-1A8MUX0 517 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 LGALS8O00214 317 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 EI24O14681 340 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 SORBS2O94875 1100 aaKnown RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 AKR7A3O95154 331 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 PTBP3O95758 552 aaKnown RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 HPRP00739 348 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 HSD17B1P14061 328 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 DESP17661 470 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 PRDX2P32119 198 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 SLC1A4P43007 532 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 ATP4BP51164 291 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 GPC3P51654 580 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 MTTPP55157 894 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 LMO4P61968 165 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 HERVK_113P63132 956 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 ERVK-8P63133 956 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 NOP14P78316 857 aaKnown RBP3.73□□□□□ -1.81
SMC4-218ENST00000486711 FCHO2Q0JRZ9 810 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 UNC50Q53HI1 259 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 FAM182AQ5T1J6 154 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 SH2D6Q7Z4S9 175 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 LMNTD2Q8IXW0 634 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 CENPSQ8N2Z9 138 aa3.73□□□□□ -1.81
SMC4-218ENST00000486711 OR4F5Q8NH21 305 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms