RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CASP3P42574 277 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 MSH2P43246 934 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 MASP1P48740 699 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 LIM2P55344 173 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 FBXW4P57775 412 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 IRX1P78414 480 aaPredicted RBP7.4□□□□□ -1.22
XRN1-212ENST00000486211 REEP5Q00765 189 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 ZNF844Q08AG5 666 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 RPS6KA2Q15349 733 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 NCMAPQ5T1S8 102 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 OR2A2Q6IF42 318 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 ENPP6Q6UWR7 440 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 TMEM64Q6YI46 380 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 DGAT2L6Q6ZPD8 337 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 PIWIL4Q7Z3Z4 852 aaKnown RBP7.4□□□□□ -1.22
XRN1-212ENST00000486211 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 RHOT2Q8IXI1 618 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 FAM71DQ8N9W8 422 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 TRPV3Q8NET8 790 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 KRT35Q92764 455 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 PROX1Q92786 737 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 ALKBH8Q96BT7 664 aaKnown RBP7.4□□□□□ -1.22
XRN1-212ENST00000486211 HAUS8Q9BT25 410 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 NTMT1Q9BV86 223 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 OR2B2Q9GZK3 357 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 RASSF4Q9H2L5 321 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 KLHL42Q9P2K6 505 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 ADAMTS6Q9UKP5 1117 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 INTUQ9ULD6 942 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 PDE10AQ9Y233 779 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 MRPS33Q9Y291 106 aaKnown RBP7.4□□□□□ -1.22
XRN1-212ENST00000486211 CRYL1Q9Y2S2 319 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 A0A0A6YYJ9 748 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 SLC22A20A6NK97 555 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 SLCO1B7G3V0H7 640 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 CLOCKO15516 846 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 LDB3O75112 727 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 SERPINC1P01008 464 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 CCDC166P0CW27 439 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 ENO3P13929 434 aaPredicted RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 NMBRP28336 390 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 RPL22P35268 128 aaKnown RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 ZBED6P86452 979 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 ID2Q02363 134 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 STX4Q12846 297 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 CTBP1Q13363 440 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 SERTAD2Q14140 314 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 EBPQ15125 230 aaKnown RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 TCEAL1Q15170 157 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 TTLL9Q3SXZ7 439 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 CCDC181Q5TID7 509 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 RBM43Q6ZSC3 357 aaKnown RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 P4HA3Q7Z4N8 544 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 ATG4DQ86TL0 474 aaPredicted RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 GPSM1Q86YR5 675 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 TBC1D19Q8N5T2 526 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 BANPQ8N9N5 519 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 KBTBD8Q8NFY9 601 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 FIG4Q92562 907 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 FAM168AQ92567 244 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 KAT2AQ92830 837 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
XRN1-212ENST00000486211 NEIL2Q969S2 332 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 MS4A6EQ96DS6 147 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 SNF8Q96H20 258 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 TRIM2Q9C040 744 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 ACTR6Q9GZN1 396 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 WWTR1Q9GZV5 400 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 RNF122Q9H9V4 155 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 DAPP1Q9UN19 280 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 EFR3BQ9Y2G0 817 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.39□□□□□ -1.235e-9■□□□□ 10
XRN1-212ENST00000486211 EXPH5Q8NEV8 1989 aa7.39□□□□□ -1.23
XRN1-212ENST00000486211 ERI2A8K979 691 aaKnown RBP7.38□□□□□ -1.23
XRN1-212ENST00000486211 VWC2LB2RUY7 222 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 E5RI56 91 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 GOLGA8TH3BQL2 631 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 TP53I11O14683 189 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 GSC2O15499 205 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 ERI3O43414 337 aaKnown RBP7.38□□□□□ -1.23
XRN1-212ENST00000486211 B3GALT2O43825 422 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 DLX3O60479 287 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 TBX6O95947 436 aaPredicted RBP7.38□□□□□ -1.23
XRN1-212ENST00000486211 GAS8O95995 478 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 CLPSP04118 112 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 CD3EP07766 207 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 SAT1P21673 171 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 CERS1P27544 350 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 CDC25BP30305 580 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 PTPN7P35236 360 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 GCKP35557 465 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 IGLV3-21P80748 117 aaPredicted RBP7.38□□□□□ -1.23
XRN1-212ENST00000486211 NR1I3Q14994 352 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 EFTUD2Q15029 972 aaKnown RBP eCLIP7.38□□□□□ -1.234e-15■■■□□ 19.1
XRN1-212ENST00000486211 CYP1B1Q16678 543 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 EXOC3L2Q2M3D2 409 aa7.38□□□□□ -1.23
XRN1-212ENST00000486211 AWAT1Q58HT5 328 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms