RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 LARP4Q71RC2 724 aaKnown RBP eCLIP10.99□□□□□ -0.65
HPS4-214ENST00000485842 R3HCC1LQ7Z5L2 792 aaKnown RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 TMEM156Q8N614 296 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SIMC1Q8NDZ2 872 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 OR7A2PQ8NGA2 310 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 OR5L2Q8NGL0 311 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 OR8K3Q8NH51 312 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SUN3Q8TAQ9 357 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ZNF675Q8TD23 568 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 NUDT8Q8WV74 236 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 HAS2Q92819 552 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 CIDECQ96AQ7 238 aaPredicted RBP10.99□□□□□ -0.65
HPS4-214ENST00000485842 WWTR1Q9GZV5 400 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 RNF32Q9H0A6 362 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 OR10A5Q9H207 317 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 GLIPR2Q9H4G4 154 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ANKRA2Q9H9E1 313 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 SLAMF7Q9NQ25 335 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ASIC5Q9NY37 505 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 TAS2R7Q9NYW3 318 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 ANAPC2Q9UJX6 822 aa10.99□□□□□ -0.65
HPS4-214ENST00000485842 TRAV17A0A0B4J275 112 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 C2orf92A0A1B0GVN3 265 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 OR6C76A6NM76 312 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 TCP11X1B4DZS4 312 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 B8ZZF3 427 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 DYNC1I1O14576 645 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 TBX19O60806 448 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 CBX7O95931 251 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 DDX5P17844 614 aaKnown RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 S1PR1P21453 382 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 GPC1P35052 558 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 CD96P40200 585 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 MC3RP41968 323 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 TNFSF10P50591 281 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 NME5P56597 212 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 C19orf57Q0VDD7 668 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 HSPB3Q12988 150 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ZNF169Q14929 603 aaPredicted RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 EBPQ15125 230 aaKnown RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 TLR1Q15399 786 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 OR1C1Q15619 314 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 CEBPEQ15744 281 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 TRMT12Q53H54 448 aaKnown RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 OGFOD2Q6N063 350 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ZNF551Q7Z340 670 aaPredicted RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 ARMC10Q8N2F6 343 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 OR7G1Q8NGA0 311 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 OR52R1Q8NGF1 315 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ZFP28Q8NHY6 868 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 NUBPLQ8TB37 319 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 MTERF3Q96E29 417 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ZNF764Q96H86 408 aaPredicted RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 MARK4Q96L34 752 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 AMDHD1Q96NU7 426 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 RASL10BQ96S79 203 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 MYOTQ9UBF9 498 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 ATP6V1HQ9UI12 483 aa10.98□□□□□ -0.65
HPS4-214ENST00000485842 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
HPS4-214ENST00000485842 TTLL8A6PVC2 850 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 A8MVJ9 347 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ZNF195O14628 629 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SLC28A2O43868 658 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 PRAMEF2O60811 474 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SORBS2O94875 1100 aaKnown RBP10.97□□□□□ -0.65
HPS4-214ENST00000485842 ALDOCP09972 364 aaKnown RBP10.97□□□□□ -0.65
HPS4-214ENST00000485842 LAMP1P11279 417 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 PRPS1L1P21108 318 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SOX18P35713 384 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SOX3P41225 446 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 CYB561P49447 251 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 HLCSP50747 726 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 CLDN8P56748 225 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 GUCY1A3Q02108 690 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 DUSP8Q13202 625 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 NNATQ16517 81 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 MPEG1Q2M385 716 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 PGS1Q32NB8 556 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 PRR30Q53SZ7 412 aaPredicted RBP10.97□□□□□ -0.65
HPS4-214ENST00000485842 CPTPQ5TA50 214 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 TMEM198Q66K66 360 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SPINK14Q6IE38 97 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 TMEM107Q6UX40 140 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 RGS9BPQ6ZS82 235 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ACAD11Q709F0 780 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SZRD1Q7Z422 152 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SPATA19Q7Z5L4 167 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 LRRC34Q8IZ02 419 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 CYP4Z2PQ8N1L4 340 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ZNF615Q8N8J6 731 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 Q8NA96 180 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 MDS2Q8NDY4 140 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 OR7G2Q8NG99 324 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 C16orf52Q8NHV5 167 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 SLC22A8Q8TCC7 542 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 CTHRC1Q96CG8 243 aa10.97□□□□□ -0.65
HPS4-214ENST00000485842 ZBED6CLQ96FA7 236 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms