RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 BMP5P22003 454 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 SLC7A5Q01650 507 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 FNDC7Q5VTL7 733 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 C17orf53Q8N3J3 647 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-205ENST00000485397 PHF21BQ96EK2 531 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 RILPQ96NA2 401 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 GNRHR2Q96P88 292 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 ANGPTL4Q9BY76 406 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 OR10A5Q9H207 317 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 CCM2LQ9NUG4 571 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-205ENST00000485397 SLC6A5Q9Y345 797 aa17.62■□□□□ 0.41
COL27A1-205ENST00000485397 SETD2Q9BYW2 2564 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-205ENST00000485397 SEMA3DO95025 777 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 NT5EP21589 574 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 CEACAM8P31997 349 aaPredicted RBP17.61■□□□□ 0.41
COL27A1-205ENST00000485397 MASP1P48740 699 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 SERPINB8P50452 374 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 CDK9P50750 372 aaKnown RBP17.61■□□□□ 0.41
COL27A1-205ENST00000485397 XKP51811 444 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 CCNG1P51959 295 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 OR4K14Q8NGD5 310 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 NSUN5Q96P11 429 aaKnown RBP17.61■□□□□ 0.41
COL27A1-205ENST00000485397 SH3GL2Q99962 352 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 MRPL1Q9BYD6 325 aaKnown RBP17.61■□□□□ 0.41
COL27A1-205ENST00000485397 UBQLN3Q9H347 655 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 IKBKGQ9Y6K9 419 aa17.61■□□□□ 0.41
COL27A1-205ENST00000485397 DVL2O14641 736 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 KRT38O76015 456 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 SNX4O95219 450 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 HPNP05981 417 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 CPMP14384 443 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 S1PR1P21453 382 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 CASP3P42574 277 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 ASCL1P50553 236 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 EIPR1Q53HC9 387 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 FRG2Q64ET8 278 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 TTC19Q6DKK2 380 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-205ENST00000485397 DESI1Q6ICB0 168 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 METTL2BQ6P1Q9 378 aaKnown RBP17.6■□□□□ 0.41
COL27A1-205ENST00000485397 POMZP3Q6PJE2 187 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 FRG2BQ96QU4 278 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 SECISBP2Q96T21 854 aaKnown RBP17.6■□□□□ 0.41
COL27A1-205ENST00000485397 CLEC4MQ9H2X3 399 aaPredicted RBP17.6■□□□□ 0.41
COL27A1-205ENST00000485397 ZBTB26Q9HCK0 441 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 RASSF1Q9NS23 344 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 ZDHHC18Q9NUE0 388 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 NINJ2Q9NZG7 142 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 PCTPQ9UKL6 214 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 DTX4Q9Y2E6 619 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 C15orf41Q9Y2V0 281 aa17.6■□□□□ 0.41
COL27A1-205ENST00000485397 ZFHX3Q15911 3703 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 FAM221AA4D161 298 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 GNB5O14775 395 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 GPX3P22352 226 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 TIMP3P35625 211 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 TMED10P49755 219 aaKnown RBP17.59■□□□□ 0.41
COL27A1-205ENST00000485397 ZNF136P52737 540 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 NRG3P56975 720 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 TRAF3Q13114 568 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 TOMM20Q15388 145 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 NNATQ16517 81 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 SGO1Q5FBB7 561 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 CCNYL2Q5T2Q4 361 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 FAM219BQ5XKK7 198 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 VASNQ6EMK4 673 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 FAM111BQ6SJ93 734 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 SYT10Q6XYQ8 523 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 PACS2Q86VP3 889 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 LACC1Q8IV20 430 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 MMP21Q8N119 569 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 NINJ1Q92982 152 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 RNASE6Q93091 150 aaKnown RBP17.59■□□□□ 0.41
COL27A1-205ENST00000485397 FOXC2Q99958 501 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 NTMT1Q9BV86 223 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 TMUB1Q9BVT8 246 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 UGT2B28Q9BY64 529 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 PRDM14Q9GZV8 571 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 NXF5Q9H1B4 397 aaKnown RBP17.59■□□□□ 0.41
COL27A1-205ENST00000485397 CXXC4Q9H2H0 198 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 EPB41L4BQ9H329 900 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 ST6GALNAC2Q9UJ37 374 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 ADAM29Q9UKF5 820 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 CAMK2AQ9UQM7 478 aa17.59■□□□□ 0.41
COL27A1-205ENST00000485397 A0A1B0GTL3 188 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 IL2RAP01589 272 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ABCB1P08183 1280 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 RBP1P09455 135 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 CD99P14209 185 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 PORP16435 677 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 BMP7P18075 431 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ABCD3P28288 659 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 AGFG1P52594 562 aaKnown RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ETF1P62495 437 aaKnown RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 MGAT2Q10469 447 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 FLYWCH1Q4VC44 716 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 WIPI1Q5MNZ9 446 aaPredicted RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 DCST1Q5T197 706 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 C6orf163Q5TEZ5 329 aa17.58■□□□□ 0.4
COL27A1-205ENST00000485397 RPS27LQ71UM5 84 aaKnown RBP17.58■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF572Q7Z3I7 529 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms