RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 RNF148Q8N7C7 305 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 COLGALT1Q8NBJ5 622 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 HIST1H2ACQ93077 130 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ESAMQ96AP7 390 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ANKRD27Q96NW4 1050 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 NEDD4LQ96PU5 975 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 COQ7Q99807 217 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ECT2Q9H8V3 914 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 LIN28AQ9H9Z2 209 aaKnown RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 CUTCQ9NTM9 273 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 PLEK2Q9NYT0 353 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ZNF319Q9P2F9 582 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 ANKMY1Q9P2S6 941 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 DBF4Q9UBU7 674 aaPredicted RBP3.16□□□□□ -1.9
SMC4-215ENST00000484799 PSORS1C1Q9UIG5 152 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 PILRAQ9UKJ1 303 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 U3KQV3 271 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 SPATA31D1Q6ZQQ2 1576 aa3.16□□□□□ -1.9
SMC4-215ENST00000484799 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 SHISA7A6NL88 538 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 CLDN3O15551 220 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 ZNF354AO60765 605 aaPredicted RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 SMPD2O60906 423 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 PEX11AO75192 247 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 FGF19O95750 216 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 LY6G6DO95868 133 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 RPL9P32969 192 aaKnown RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 ELK3P41970 407 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 GEMP55040 296 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 PRKCEQ02156 737 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 MFGE8Q08431 387 aaPredicted RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 MSLNQ13421 630 aaPredicted RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 SNX1Q13596 522 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 LRRC37A5PQ49AS3 106 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 IL23RQ5VWK5 629 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 LYPLAL1Q5VWZ2 237 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 FAM159AQ6UWV7 190 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 ARSKQ6UWY0 536 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 OR56B1Q8NGI3 324 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 OR6M1Q8NGM8 313 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 GOLGA5Q8TBA6 731 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 DQX1Q8TE96 717 aaKnown RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 SLC35C1Q96A29 364 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 RAB39BQ96DA2 213 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 RPGRIP1Q96KN7 1286 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 APOL2Q9BQE5 337 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 DPEP3Q9H4B8 488 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 TMEM231Q9H6L2 316 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 S100A14Q9HCY8 104 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 SLC35D1Q9NTN3 355 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 DDX28Q9NUL7 540 aaKnown RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 SOHLH2Q9NX45 425 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 COPS7AQ9UBW8 275 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 PLA2G4CQ9UP65 541 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 NUDCQ9Y266 331 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 NAALAD2Q9Y3Q0 740 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 KLF2Q9Y5W3 355 aaPredicted RBP3.15□□□□□ -1.91
SMC4-215ENST00000484799 NCAPD2Q15021 1401 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 FGD5Q6ZNL6 1462 aa3.15□□□□□ -1.91
SMC4-215ENST00000484799 ABCA7Q8IZY2 2146 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 F8WDY8 70 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ANGPT2O15123 496 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 TXNDC12O95881 172 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 CD1DP15813 335 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ZBTB25P24278 435 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ADSSP30520 456 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 OR1D2P34982 312 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 MDH1P40925 334 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 PITPNBP48739 271 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 SLC26A5P58743 744 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 HERV-K104P63124 156 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 KLHL30Q0D2K2 578 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 SPP2Q13103 211 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 NME3Q13232 169 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 PDIA5Q14554 519 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 HEPACAMQ14CZ8 416 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 KARSQ15046 597 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 OR1C1Q15619 314 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 TMEM44Q2T9K0 475 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 C9orf66Q5T8R8 295 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 EMBQ6PCB8 327 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ZCCHC12Q6PEW1 402 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 AFTPHQ6ULP2 937 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 TMEM64Q6YI46 380 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 VPS36Q86VN1 386 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 HIPK1Q86Z02 1210 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ZC3H3Q8IXZ2 948 aaKnown RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 OR5M9Q8NGP3 310 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 OR4Q3Q8NH05 313 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 C8orf46Q8TAG6 207 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ZNF274Q96GC6 653 aaPredicted RBP3.14□□□□□ -1.91
SMC4-215ENST00000484799 TAAR6Q96RI8 345 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 GPA33Q99795 319 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 CBWD1Q9BRT8 395 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 FICDQ9BVA6 458 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 RIBC2Q9H4K1 309 aa3.14□□□□□ -1.91
SMC4-215ENST00000484799 ZNF665Q9H7R5 613 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms