RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 TMEM89A2RUT3 159 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 MPTX1A8MV57 137 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 DCXO43602 365 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 SYNGR4O95473 234 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 AK1P00568 194 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 FCARP24071 287 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 GIFP27352 417 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 MDH1P40925 334 aaKnown RBP5.6□□□□□ -1.51
UBR3-210ENST00000484596 NUMBP49757 651 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 CCL11P51671 97 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 CCR4P51679 360 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 MTTPP55157 894 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 TMEM50BP56557 158 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 GABPB1Q06547 395 aaPredicted RBP5.6□□□□□ -1.51
UBR3-210ENST00000484596 MTF1Q14872 753 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 ANKDD1AQ495B1 522 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 LDLRAP1Q5SW96 308 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 AFTPHQ6ULP2 937 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 CDHR3Q6ZTQ4 885 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 CATSPERDQ86XM0 798 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 ELMOD1Q8N336 334 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 FAM71CQ8NEG0 241 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 OR4L1Q8NH43 312 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 SMPDL3AQ92484 453 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 TRIM44Q96DX7 344 aaPredicted RBP5.6□□□□□ -1.51
UBR3-210ENST00000484596 ZNF274Q96GC6 653 aaPredicted RBP5.6□□□□□ -1.51
UBR3-210ENST00000484596 VPS39Q96JC1 886 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 RPGRIP1Q96KN7 1286 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 AGPAT1Q99943 283 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 OVOL2Q9BRP0 275 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 FUNDC2Q9BWH2 189 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 COQ10BQ9H8M1 238 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 IL20RAQ9UHF4 553 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 OR1A2Q9Y585 309 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 U3KQV3 271 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 ABCA3Q99758 1704 aa5.6□□□□□ -1.51
UBR3-210ENST00000484596 ANKRD30AQ9BXX3 1397 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 ECE2O60344 883 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 MTRF1O75570 445 aaKnown RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 PROS1P07225 676 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 TPBGLP0DKB5 382 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 RALAP11233 206 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 GNSP15586 552 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 C4BPBP20851 252 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 VEGFCP49767 419 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 DHODHQ02127 395 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 FASTKD3Q14CZ7 662 aaKnown RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 GPAT3Q53EU6 434 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 ZNF613Q6PF04 617 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 MCM10Q7L590 875 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 BNIPLQ7Z465 357 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 LRRC17Q8N6Y2 441 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 CCDC197Q8NCU1 140 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 IPMKQ8NFU5 416 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 OR6M1Q8NGM8 313 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 FCGR1BQ92637 280 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 MOCOSQ96EN8 888 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 AGAP3Q96P47 875 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 SYT11Q9BT88 431 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 THUMPD2Q9BTF0 503 aaKnown RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 NMNAT2Q9BZQ4 307 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 UPF3AQ9H1J1 476 aaKnown RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 HPS4Q9NQG7 708 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 NDE1Q9NXR1 346 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 MRTO4Q9UKD2 239 aaKnown RBP5.59□□□□□ -1.51
UBR3-210ENST00000484596 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 KNDC1Q76NI1 1749 aa5.59□□□□□ -1.51
UBR3-210ENST00000484596 NCAPD2Q15021 1401 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 SNED1Q8TER0 1413 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 BRWD3Q6RI45 1802 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 NPIPB9F8W1W9 429 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 CLDN3O15551 220 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 TXNDC12O95881 172 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 DPEP1P16444 411 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 GPR183P32249 361 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 ALDH3B1P43353 468 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 NLRP11P59045 1033 aaKnown RBP5.58□□□□□ -1.52
UBR3-210ENST00000484596 ERVK-16P61578 105 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 PDZK1IP1Q13113 114 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 SNX1Q13596 522 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 PDIA5Q14554 519 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 MOGAT2Q3SYC2 334 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 MPPE1Q53F39 396 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 IL23RQ5VWK5 629 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 HIST2H2AA3Q6FI13 130 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 LCLAT1Q6UWP7 414 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 ARSKQ6UWY0 536 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 AMZ2Q86W34 360 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 OR10G7Q8NGN6 311 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 GPR148Q8TDV2 347 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 SELENOMQ8WWX9 145 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 ERGIC2Q96RQ1 377 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 PAPOLGQ9BWT3 736 aaKnown RBP5.58□□□□□ -1.52
UBR3-210ENST00000484596 EGLN1Q9GZT9 426 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 NACA2Q9H009 215 aa5.58□□□□□ -1.52
UBR3-210ENST00000484596 ROPN1Q9HAT0 212 aaPredicted RBP5.58□□□□□ -1.52
UBR3-210ENST00000484596 TBK1Q9UHD2 729 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms