RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 POLR3HQ9Y535 204 aaPredicted RBP11.34□□□□□ -0.59
MSH5-216ENST00000484309 PHF3Q92576 2039 aaKnown RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 C2orf92A0A1B0GVN3 265 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 P04436 131 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ANXA4P09525 319 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 CSNK2A2P19784 350 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 ALDH3A1P30838 453 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 PIGAP37287 484 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 TRA2BP62995 288 aaKnown RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 MRPS35P82673 323 aaKnown RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 FUT7Q11130 342 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 CMPK2Q5EBM0 449 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 HLA-DQA1Q5Y7H0 255 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 C3P1Q6ZMU1 363 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ZCCHC23Q6ZST2 131 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 MAMDC2Q7Z304 686 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 FGD2Q7Z6J4 655 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 CHERPQ8IWX8 916 aaKnown RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ZNF615Q8N8J6 731 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ZFP62Q8NB50 900 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 OR10G3Q8NGC4 313 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 RELTQ969Z4 430 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 SPACA9Q96E40 222 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 CCDC120Q96HB5 630 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ANKRA2Q9H9E1 313 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 MKS1Q9NXB0 559 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 TUBA8Q9NY65 449 aaPredicted RBP11.33□□□□□ -0.6
MSH5-216ENST00000484309 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ZNF780BQ9Y6R6 833 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 ARHGAP21Q5T5U3 1957 aa11.33□□□□□ -0.6
MSH5-216ENST00000484309 A0A1B0GTH9 108 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 OR6C76A6NM76 312 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 TMEM233B4DJY2 109 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 TRIM13O60858 407 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 NME6O75414 186 aaPredicted RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 CHRNGP07510 517 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 FBXO45P0C2W1 286 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 UROSP10746 265 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 S1PR1P21453 382 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 CNR1P21554 472 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 GPX3P22352 226 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 SOX18P35713 384 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 CASP6P55212 293 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 NAA20P61599 178 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 MGAT2Q10469 447 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 DUSP8Q13202 625 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 PRSS53Q2L4Q9 553 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 PRICKLE4Q2TBC4 344 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 ZNF791Q3KP31 576 aaPredicted RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 TRMT12Q53H54 448 aaKnown RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 LRRC25Q8N386 305 aaPredicted RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 ZNF441Q8N8Z8 693 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 GOLM1Q8NBJ4 401 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 C16orf52Q8NHV5 167 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 AGR3Q8TD06 166 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 KAT2AQ92830 837 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 SGCZQ96LD1 299 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 ZNF681Q96N22 645 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 SMC6Q96SB8 1091 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 FAM173AQ9BQD7 235 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 ITPAQ9BY32 194 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 ROPN1BQ9BZX4 212 aaPredicted RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 ROPN1Q9HAT0 212 aaPredicted RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 SUCOQ9UBS9 1254 aaKnown RBP11.32□□□□□ -0.6
MSH5-216ENST00000484309 PSME2Q9UL46 239 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 LIPGQ9Y5X9 500 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 MAST4O15021 2626 aa11.32□□□□□ -0.6
MSH5-216ENST00000484309 SERTM1A2A2V5 107 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 ACOT7O00154 380 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 AZIN1O14977 448 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 CBX7O95931 251 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 ATP1B1P05026 303 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 TPOP07202 933 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 CELA3AP09093 270 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 ESRRAP11474 423 aaPredicted RBP11.31□□□□□ -0.6
MSH5-216ENST00000484309 PCSK2P16519 638 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 MAGEA5P43359 124 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 FBXW4P57775 412 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 KCNJ2P63252 427 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 ZNF844Q08AG5 666 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 C2orf80Q0P641 193 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 SLC22A10Q63ZE4 541 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 BICRALQ6AI39 1079 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 GK5Q6ZS86 529 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 TAGAPQ8N103 731 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 MREGQ8N565 214 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 SLC15A4Q8N697 577 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 OR52R1Q8NGF1 315 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 OR9A2Q8NGT5 310 aa11.31□□□□□ -0.6
MSH5-216ENST00000484309 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms