RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 KRT78Q8N1N4 520 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 SETD6Q8TBK2 473 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 TM9SF4Q92544 642 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 TMPRSS11EQ9UL52 423 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 ING4Q9UNL4 249 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 MYO16Q9Y6X6 1858 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 LATO43561 262 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 HRO43593 1189 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 POP7O75817 140 aaKnown RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 DRD5P21918 477 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 PSMB5P28074 263 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 CD79BP40259 229 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 CRYBB2P43320 205 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 NCBP2P52298 156 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 13
VPS52-218ENST00000482399 WNT4P56705 351 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 MRPL58Q14197 206 aaKnown RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 ANKRD54Q6NXT1 300 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 CCDC116Q8IYX3 515 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 OR52I1Q8NGK6 324 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 GLYATL1Q969I3 302 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 SLC35G5Q96KT7 338 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 WFDC6Q9BQY6 131 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 EFCAB11Q9BUY7 163 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 CLEC4MQ9H2X3 399 aaPredicted RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 DMRT3Q9NQL9 472 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 NUDT15Q9NV35 164 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 EIF3KQ9UBQ5 218 aaKnown RBP12.05□□□□□ -0.48
VPS52-218ENST00000482399 F5P12259 2224 aa12.05□□□□□ -0.48
VPS52-218ENST00000482399 HYKKA2RU49 373 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PPM1DO15297 605 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 GRM6O15303 877 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SYPP08247 313 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 MPC1LP0DKB6 136 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 ARAFP10398 606 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PTPN2P17706 415 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 ZNF81P51508 661 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RAB14P61106 215 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RHAGQ02094 409 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SP140Q13342 867 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CAMK2BQ13554 666 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 EFR3AQ14156 821 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 POU4F3Q15319 338 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 MZT2AQ6P582 158 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SLCO4C1Q6ZQN7 724 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PROKR2Q8NFJ6 384 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CREB3L4Q8TEY5 395 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CHTF18Q8WVB6 975 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 KATNB1Q9BVA0 655 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 DPCDQ9BVM2 203 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 SAP130Q9H0E3 1048 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SLA2Q9H6Q3 261 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RC3H2Q9HBD1 1191 aaKnown RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 ENAMQ9NRM1 1142 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 A0A075B6Q4 140 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 GFYI3L273 518 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 FFAR1O14842 300 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 NOS3P29474 1203 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 OR3A3P47888 321 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SMSP52788 366 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ABATP80404 500 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 HYAL2Q12891 473 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RPA4Q13156 261 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 KLHL22Q53GT1 634 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
VPS52-218ENST00000482399 CBARPQ8N350 705 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 GDPD1Q8N9F7 314 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ZNF671Q8TAW3 534 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 MAGEB10Q96LZ2 347 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 TREX2Q9BQ50 279 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 XKR8Q9H6D3 395 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CWH43Q9H720 699 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ADAM30Q9UKF2 790 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 PCP4L1A6NKN8 68 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 H0YIV9 168 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ERVH48-1M5A8F1 160 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 HYAL3O43820 417 aaPredicted RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SMIM11AP58511 58 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 FCRLBQ6BAA4 426 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 GANCQ8TET4 914 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 RASSF5Q8WWW0 418 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ING5Q8WYH8 240 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 SLC25A46Q96AG3 418 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 ECHDC3Q96DC8 303 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
VPS52-218ENST00000482399 MGAT4AQ9UM21 535 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
VPS52-218ENST00000482399 NCKAP1Q9Y2A7 1128 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms