RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 IER3P46695 156 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CCT3P49368 545 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 BLKP51451 505 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 RGS8P57771 180 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 OR2B6P58173 313 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 NLRP11P59045 1033 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 IRX4P78413 519 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 RHAGQ02094 409 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CFHR1Q03591 330 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CDC20Q12834 499 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 STX5Q13190 355 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 KEAP1Q14145 624 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ETFDHQ16134 617 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 MRPL23Q16540 153 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 HIST2H2ACQ16777 129 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 AGKQ53H12 422 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 LACTB2Q53H82 288 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 ACTBL2Q562R1 376 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CMPK2Q5EBM0 449 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 LYSMD4Q5XG99 296 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CTRB2Q6GPI1 263 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 OR5M10Q6IEU7 315 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 AADACL2Q6P093 401 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 NIPAL3Q6P499 406 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 TTC33Q6PID6 262 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 ZNF66Q6ZN08 573 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 LRRC74BQ6ZQY2 392 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 RTL4Q6ZR62 310 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 MEPCEQ7L2J0 689 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 ABHD12BQ7Z5M8 362 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 RNF130Q86XS8 419 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 KLBQ86Z14 1044 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 DCUN1D3Q8IWE4 304 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PARP8Q8N3A8 854 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ZCCHC9Q8N567 271 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 CEP112Q8N8E3 955 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PROKR2Q8NFJ6 384 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 OR13C9Q8NGT0 318 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 HCAR2Q8TDS4 363 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CHPT1Q8WUD6 406 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 HTR3CQ8WXA8 447 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 SUSD6Q92537 303 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CCDC127Q96BQ5 260 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 IGSF21Q96ID5 467 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 TMEM175Q9BSA9 504 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 MSTO1Q9BUK6 570 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 WRAP53Q9BUR4 548 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 RBM24Q9BX46 236 aaKnown RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 KCNN2Q9H2S1 579 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ELOVL6Q9H5J4 265 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 FOLH1BQ9HBA9 442 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 MLXIPLQ9NP71 852 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 DMAP1Q9NPF5 467 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 RRAGDQ9NQL2 400 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 PXMP2Q9NR77 195 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 TMEM248Q9NWD8 314 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 SLC2A8Q9NY64 477 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 SPHK1Q9NYA1 384 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 PSMD13Q9UNM6 376 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 FAF1Q9UNN5 650 aaPredicted RBP3.82□□□□□ -1.8
VPS41-212ENST00000482217 PIGLQ9Y2B2 252 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PLLPQ9Y342 182 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 OR10H1Q9Y4A9 318 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 CACNG2Q9Y698 323 aa3.82□□□□□ -1.8
VPS41-212ENST00000482217 PRDM2Q13029 1718 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 FHAD1B1AJZ9 1412 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 GRIN2DO15399 1336 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 MN1Q10571 1320 aaPredicted RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 A0A1W2PPK0 400 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SLC22A23A1A5C7 686 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ILVBLA1L0T0 632 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PRSS37A4D1T9 235 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 OR6C68A6NDL8 312 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 FABP12A6NFH5 140 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 ZNF99A8MXY4 864 aaPredicted RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 PRSS46E5RG02 174 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 E9PQ18 207 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 KLRC4-KLRK1H3BQV0 150 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 NBR2O15453 112 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 PLPP2O43688 288 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 RBMXL2O75526 392 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 JRKO75564 520 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 RAD51DO75771 328 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 OR2F2O95006 317 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SCELO95171 688 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 H6PDO95479 791 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CPNE6O95741 557 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 TOP3BO95985 862 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 MT-CYBP00156 380 aaPredicted RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 HIST1H2ABP04908 130 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 LCKP06239 509 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SERPINA6P08185 405 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 SNRPAP09012 282 aaKnown RBP3.81□□□□□ -1.8
VPS41-212ENST00000482217 HOXB5P09067 269 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 CYP11B1P15538 503 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 HIST1H2ADP20671 130 aa3.81□□□□□ -1.8
VPS41-212ENST00000482217 EEF1B2P24534 225 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms