RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF180Q9UJW8 692 aa17.05■□□□□ 0.32
CLK1-211ENST00000481641 ADAM29Q9UKF5 820 aa17.05■□□□□ 0.32
CLK1-211ENST00000481641 DTX4Q9Y2E6 619 aa17.05■□□□□ 0.32
CLK1-211ENST00000481641 A0A0G2JNJ9 132 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 HCN1O60741 890 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 CNTFP26441 200 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 MSX1P28360 303 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 GCAP28676 217 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 MAPK12P53778 367 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 GALNT1Q10472 559 aaPredicted RBP17.04■□□□□ 0.32
CLK1-211ENST00000481641 TCHHL1Q5QJ38 904 aaPredicted RBP17.04■□□□□ 0.32
CLK1-211ENST00000481641 C1orf185Q5T7R7 199 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 WLSQ5T9L3 541 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 HLA-DQA1Q5Y7H0 255 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 FAM180BQ6P0A1 224 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 FAM111BQ6SJ93 734 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 PAGE2Q7Z2X7 111 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 LIX1LQ8IVB5 337 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 DND1Q8IYX4 353 aaKnown RBP17.04■□□□□ 0.32
CLK1-211ENST00000481641 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
CLK1-211ENST00000481641 MNS1Q8NEH6 495 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 SELENOMQ8WWX9 145 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 ADIPOR1Q96A54 375 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 MCCC2Q9HCC0 563 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 Q9UFV3 132 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 CES1P1Q9UKY3 287 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 PCDHA9Q9Y5H5 950 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 NPFFR2Q9Y5X5 522 aa17.04■□□□□ 0.32
CLK1-211ENST00000481641 EXOC1LA0A1B0GW35 172 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 TRIM3O75382 744 aaPredicted RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 ERAL1O75616 437 aaKnown RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 OR4F21O95013 312 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 OTCP00480 354 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 SNRPAP09012 282 aaKnown RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 PORP16435 677 aaPredicted RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 S1PR1P21453 382 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 FEN1P39748 380 aaKnown RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 DUSP2Q05923 314 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 TBL3Q12788 808 aaKnown RBP17.03■□□□□ 0.32
CLK1-211ENST00000481641 NNATQ16517 81 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 DESI1Q6ICB0 168 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 SIMC1Q8NDZ2 872 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 TP53INP1Q96A56 240 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 TM4SF18Q96CE8 201 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 BRINP2Q9C0B6 783 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 TMEM216Q9P0N5 145 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 NFU1Q9UMS0 254 aa17.03■□□□□ 0.32
CLK1-211ENST00000481641 KDM4EB2RXH2 506 aaPredicted RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 TP53I11O14683 189 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 WDR1O75083 606 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 CHN1P15882 459 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 GPX3P22352 226 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 GDF1P27539 372 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 SOX18P35713 384 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 HSD17B3P37058 310 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 ZFP36L2P47974 494 aaKnown RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 CLCQ05315 142 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 MGAT2Q10469 447 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 DUSP8Q13202 625 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 EXOSC7Q15024 291 aaKnown RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 RPS6KA2Q15349 733 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 UNC50Q53HI1 259 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 TMEM198Q66K66 360 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 SLC48A1Q6P1K1 146 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 C1orf52Q8N6N3 182 aaKnown RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 ADCY4Q8NFM4 1077 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 NEIL3Q8TAT5 605 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 SPPL2AQ8TCT8 520 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 ZNF597Q96LX8 424 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 RILPQ96NA2 401 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 C1QTNF3Q9BXJ4 246 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 NXF5Q9H1B4 397 aaKnown RBP17.02■□□□□ 0.32
CLK1-211ENST00000481641 ACKR4Q9NPB9 350 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 SNX6Q9UNH7 406 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 CELSR1Q9NYQ6 3014 aa17.02■□□□□ 0.32
CLK1-211ENST00000481641 F8P00451 2351 aa17.02■□□□□ 0.31
CLK1-211ENST00000481641 ARHGAP21Q5T5U3 1957 aa17.02■□□□□ 0.31
CLK1-211ENST00000481641 EXPH5Q8NEV8 1989 aa17.02■□□□□ 0.31
CLK1-211ENST00000481641 DLX3O60479 287 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
CLK1-211ENST00000481641 ALDH9A1P49189 494 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 PRICKLE4Q2TBC4 344 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 C10orf62Q5T681 223 aaPredicted RBP17.01■□□□□ 0.31
CLK1-211ENST00000481641 C6orf163Q5TEZ5 329 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 FNDC7Q5VTL7 733 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 DMRTC2Q8IXT2 367 aaPredicted RBP17.01■□□□□ 0.31
CLK1-211ENST00000481641 LIX1Q8N485 282 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 CDYL2Q8N8U2 506 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 OR7G1Q8NGA0 311 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 GNRHR2Q96P88 292 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 QPCTLQ9NXS2 382 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 MAT2BQ9NZL9 334 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 TRPS1Q9UHF7 1281 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 BCAP29Q9UHQ4 241 aa17.01■□□□□ 0.31
CLK1-211ENST00000481641 ANKRD17O75179 2603 aaKnown RBP17.01■□□□□ 0.31
CLK1-211ENST00000481641 C15orf38-AP3S2A0A0A6YYH1 394 aa17■□□□□ 0.31
CLK1-211ENST00000481641 C1orf226A1L170 272 aa17■□□□□ 0.31
CLK1-211ENST00000481641 ANKRD33BA6NCL7 494 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms