RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM181Q9P2C4 612 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ERVK-19Q9WJR5 959 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 PYGO1Q9Y3Y4 419 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 LOXHD1Q8IVV2 1947 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZMYM6O95789 1325 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 NEDD4P46934 1319 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 MYH9P35579 1960 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 hCG_38984A0A1B0GV85 526 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 ATP6AP2A0A1C7CYW4 349 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 RNF103O00237 685 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC28A1O00337 649 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 NR5A2O00482 541 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF195O14628 629 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CHUKO15111 745 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 P2RX6O15547 441 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 IDH1O75874 414 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 STBD1O95210 358 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CXCL14O95715 111 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 GAS8O95995 478 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CPA3P15088 417 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 EDNRAP25101 427 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CTNNA2P26232 953 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 OR1D2P34982 312 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CLK1P49759 484 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCR4P51679 360 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC12A3P55017 1021 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 XGP55808 180 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 IRX4P78413 519 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 GABPAQ06546 454 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CNTN1Q12860 1018 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 MSLNQ13421 630 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 HNRNPDQ14103 355 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 GK2Q14410 553 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 LRRC37A5PQ49AS3 106 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCDC92Q53HC0 331 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 CNSTQ6PJW8 725 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 C17orf107Q6ZR85 190 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 Q6ZSR9 355 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 PTAR1Q7Z6K3 402 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZSCAN30Q86W11 494 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC22A15Q8IZD6 547 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 FBXW8Q8N3Y1 598 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 OR6S1Q8NH40 331 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SPATA18Q8TC71 538 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 HAS2Q92819 552 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC35C1Q96A29 364 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 BPIFA2Q96DR5 249 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 ASCL2Q99929 193 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 HOXD1Q9GZZ0 328 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 WDR13Q9H1Z4 485 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 TNMDQ9H2S6 317 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 MTHFD2LQ9H903 347 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 KCNMB3Q9NPA1 279 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 UBQLN2Q9UHD9 624 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 PSORS1C1Q9UIG5 152 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 PILRAQ9UKJ1 303 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 TSPAN16Q9UKR8 245 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 POMT2Q9UKY4 750 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 PRSS21Q9Y6M0 314 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 SCN10AQ9Y5Y9 1956 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF532Q9HCE3 1301 aa3.43□□□□□ -1.86
CDC42BPA-212ENST00000478573 NLRC5Q86WI3 1866 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 A0A087X002 238 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SRRM4A7MD48 611 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 LMO7DNF2Z398 122 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 PDHXO00330 501 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SURF4O15260 269 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 MAGEB2O15479 319 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SEC22BO75396 215 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZFAND5O76080 213 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 FERP16591 822 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 C4BPBP20851 252 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 IL10P22301 178 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ACKR3P25106 362 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 HOXD10P28358 340 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 LUMP51884 338 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 CASP9P55211 416 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 BACE1P56817 501 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 DYNLL1P63167 89 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 MFGE8Q08431 387 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 MEF2DQ14814 521 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 STX1AQ16623 288 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SGSM1Q2NKQ1 1148 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZFP69Q49AA0 526 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SBK1Q52WX2 424 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SPANXN4Q5MJ08 99 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 PWWP2BQ6NUJ5 590 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 CATSPERDQ86XM0 798 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 STHQ8IWL8 128 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 DND1Q8IYX4 353 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SPAG16Q8N0X2 631 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 OR13C5Q8NGS8 318 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 URGCPQ8TCY9 931 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 GANCQ8TET4 914 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 DTD2Q96FN9 168 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF486Q96H40 463 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 MAGED4Q96JG8 741 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 CDHR1Q96JP9 859 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms