RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 FAM109AQ8N4B1 249 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 TMEM251Q8N6I4 163 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 EPS8L3Q8TE67 593 aaKnown RBP21.58■■□□□ 1.05
C9orf3-215ENST00000478473 CNRIP1Q96F85 164 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-215ENST00000478473 GAL3ST4Q96RP7 486 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 SECISBP2Q96T21 854 aaKnown RBP21.58■■□□□ 1.05
C9orf3-215ENST00000478473 SHCBP1LQ9BZQ2 653 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 MAT2BQ9NZL9 334 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 HEY2Q9UBP5 337 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 CNOT11Q9UKZ1 510 aaKnown RBP21.58■■□□□ 1.05
C9orf3-215ENST00000478473 EML6Q6ZMW3 1958 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 OR14I1A6ND48 311 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 ZNF630Q2M218 657 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-215ENST00000478473 TRIM46Q7Z4K8 759 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 VWA5B2Q8N398 1253 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 RIBC1Q8N443 379 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-215ENST00000478473 APIPQ96GX9 242 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 TUBA8Q9NY65 449 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-215ENST00000478473 TIMM22Q9Y584 194 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 HRH3Q9Y5N1 445 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 ZNF407Q9C0G0 2248 aa21.57■■□□□ 1.04
C9orf3-215ENST00000478473 CAPN14A8MX76 684 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 NPIPB8E9PQR5 432 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 ZNHIT1O43257 154 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 NAGAP17050 411 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 KRT4P19013 534 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 NT5EP21589 574 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 DNASE1L1P49184 302 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 NAGLUP54802 743 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 FOXA1P55317 472 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 PLGLB1Q02325 96 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 EMC4Q5J8M3 183 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 TBCELQ5QJ74 424 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 SP5Q6BEB4 398 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 SAMD14Q8IZD0 417 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 LRRC25Q8N386 305 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 CCNYL1Q8N7R7 359 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 OR10G3Q8NGC4 313 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 ZNF675Q8TD23 568 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 ERP27Q96DN0 273 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 METTL2AQ96IZ6 378 aaKnown RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 KCNA7Q96RP8 456 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 DEFB127Q9H1M4 99 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 MID1IP1Q9NPA3 183 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 QPCTLQ9NXS2 382 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 EHD3Q9NZN3 535 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 CFL2Q9Y281 166 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 DLGAP4Q9Y2H0 992 aa21.56■■□□□ 1.04
C9orf3-215ENST00000478473 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.56■■□□□ 1.04
C9orf3-215ENST00000478473 G3V3Y1 287 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 COPEO14579 308 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 PCDH7O60245 1069 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 SUSD5O60279 629 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 CPA3P15088 417 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 GPX3P22352 226 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 TIA1P31483 386 aaKnown RBP eCLIP21.55■■□□□ 1.04
C9orf3-215ENST00000478473 PIGAP37287 484 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 NR0B1P51843 470 aaKnown RBP21.55■■□□□ 1.04
C9orf3-215ENST00000478473 VSNL1P62760 191 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 HMGCS1Q01581 520 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 DUSP2Q05923 314 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 ACSM2AQ08AH3 577 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 C6orf163Q5TEZ5 329 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 ACSM2BQ68CK6 577 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 TMEM81Q6P7N7 255 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 RNF165Q6ZSG1 346 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 TRILQ7L0X0 811 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 KLHL29Q96CT2 875 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 WBP11Q9Y2W2 641 aaKnown RBP21.55■■□□□ 1.04
C9orf3-215ENST00000478473 NPFFR2Q9Y5X5 522 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 DNAJC13O75165 2243 aa21.55■■□□□ 1.04
C9orf3-215ENST00000478473 FAM166BA8MTA8 275 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 PRSS44E7EML9 344 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 HNRNPRO43390 633 aaKnown RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 ERAL1O75616 437 aaKnown RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 CBX7O95931 251 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 FEN1P39748 380 aaKnown RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 MAGEA5P43359 124 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 TMED10P49755 219 aaKnown RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 DUSP8Q13202 625 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 HEPACAMQ14CZ8 416 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 RPS6KA2Q15349 733 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 WDR93Q6P2C0 686 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 FAM111BQ6SJ93 734 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 CD163Q86VB7 1156 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 TICAM1Q8IUC6 712 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 FAM76AQ8TAV0 307 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 AENQ8WTP8 325 aaKnown RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 C16orf78Q8WTQ4 265 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 TP63Q9H3D4 680 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 ZNF703Q9H7S9 590 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-215ENST00000478473 ZFP64Q9NPA5 681 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 CHST11Q9NPF2 352 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 LGALS13Q9UHV8 139 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 MID2Q9UJV3 735 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 CCL27Q9Y4X3 112 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 ZNF780BQ9Y6R6 833 aa21.54■■□□□ 1.04
C9orf3-215ENST00000478473 CACNA1DQ01668 2161 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms