RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 PCCBP05166 539 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 THRBP10828 461 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 HNRNPA2B1P22626 353 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ACKR3P25106 362 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 RPL9P32969 192 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 HSPA1LP34931 641 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 DEKP35659 375 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 MAGEB1P43366 347 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 PGFP49763 221 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 SMSP52788 366 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 CRYBA2P53672 197 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 NDUFV3P56181 108 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 BACE1P56817 501 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 SRP54P61011 504 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 LMO4P61968 165 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 SRPXP78539 464 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 GALK2Q01415 458 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 GABPB1Q06547 395 aaPredicted RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 CD300CQ08708 224 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 KCTD21Q4G0X4 260 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 RFTN2Q52LD8 501 aaPredicted RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 FAM182AQ5T1J6 154 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ATAD3BQ5T9A4 648 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 LYPLAL1Q5VWZ2 237 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 KCTD11Q693B1 232 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 CATSPER3Q86XQ3 398 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF573Q86YE8 665 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 OR4N5Q8IXE1 308 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 PHC2Q8IXK0 858 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF679Q8IYX0 411 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 C17orf47Q8NEP4 570 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 TMEM185AQ8NFB2 350 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 OR2L2Q8NH16 312 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF671Q8TAW3 534 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 GANCQ8TET4 914 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 AP2M1Q96CW1 435 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 C16orf58Q96GQ5 468 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 EPSTI1Q96J88 318 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 CNOT6LQ96LI5 555 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 RAB11FIP5Q9BXF6 653 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 POLR1EQ9GZS1 481 aaKnown RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 TMEM117Q9H0C3 514 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 S100A14Q9HCY8 104 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 HOMER3Q9NSC5 361 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 MAD2L2Q9UI95 211 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 CFAP45Q9UL16 551 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 COL5A2P05997 1499 aaPredicted RBP3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 TTC41PQ6P2S7 1318 aa3.19□□□□□ -1.9
SMARCA1-204ENST00000478420 COL2A1P02458 1487 aaPredicted RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 TMEM94Q12767 1356 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SERINC4A6NH21 518 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 LRRIQ4A6NIV6 560 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ACOD1A6NK06 481 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SHISA7A6NL88 538 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 H0YIG0 161 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF749O43361 778 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ERLIN1O75477 346 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 CD1DP15813 335 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 CAPN2P17655 700 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 HNRNPFP52597 415 aaKnown RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 RBBP4Q09028 425 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 PDZK1IP1Q13113 114 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SNTB2Q13425 540 aaKnown RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 GIT2Q14161 759 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 KNOP1Q1ED39 458 aaKnown RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 NADK2Q4G0N4 442 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SULT1C3Q6IMI6 304 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 TMEM64Q6YI46 380 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF841Q6ZN19 808 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 KCNMB4Q86W47 210 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 EIF1ADQ8N9N8 165 aaKnown RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 OR13C2Q8NGS9 318 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SELENOMQ8WWX9 145 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 LIPHQ8WWY8 451 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 CFAP36Q96G28 342 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ALKBH3Q96Q83 286 aaPredicted RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 PSMB7Q99436 277 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 LRRC2Q9BYS8 371 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 MOB1AQ9H8S9 216 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 JPT2Q9H910 190 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 WDR41Q9HAD4 459 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 KCNMB3Q9NPA1 279 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 C6orf203Q9P0P8 240 aaPredicted RBP3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ZNF319Q9P2F9 582 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 UBQLN2Q9UHD9 624 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 TSPAN16Q9UKR8 245 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SNX6Q9UNH7 406 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 SH3GLB1Q9Y371 365 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 CSAG2Q9Y5P2 127 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 AUP1Q9Y679 476 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 NCAPD2Q15021 1401 aa3.18□□□□□ -1.9
SMARCA1-204ENST00000478420 ANHXE9PGG2 379 aa3.17□□□□□ -1.9
SMARCA1-204ENST00000478420 M0QX08 132 aa3.17□□□□□ -1.9
SMARCA1-204ENST00000478420 OGTO15294 1046 aa3.17□□□□□ -1.9
SMARCA1-204ENST00000478420 B4GAT1O43505 415 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms