RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SUN3Q8TAQ9 357 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 LRRC8CQ8TDW0 803 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 HAS2Q92819 552 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 KAT2AQ92830 837 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 SIGLEC12Q96PQ1 595 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 BBS4Q96RK4 519 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 UTP23Q9BRU9 249 aaKnown RBP9.53□□□□□ -0.88
HDAC6-222ENST00000478095 HES7Q9BYE0 225 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 RNF32Q9H0A6 362 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 AKTIPQ9H8T0 292 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 INTS9Q9NV88 658 aaKnown RBP9.53□□□□□ -0.88
HDAC6-222ENST00000478095 MAT2BQ9NZL9 334 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 EHD3Q9NZN3 535 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 MYOTQ9UBF9 498 aa9.53□□□□□ -0.88
HDAC6-222ENST00000478095 TLN1Q9Y490 2541 aaKnown RBP9.53□□□□□ -0.88
HDAC6-222ENST00000478095 TRAV17A0A0B4J275 112 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 KLF11O14901 512 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF354AO60765 605 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 G6PDP11413 515 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 EFNA1P20827 205 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 NTSP30990 170 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 GALNSP34059 522 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SSR4P51571 173 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 NCBP2P52298 156 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SLC37A1P57057 533 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 MGAT2Q10469 447 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 FUT7Q11130 342 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 DUSP8Q13202 625 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 EXOSC7Q15024 291 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 EBPQ15125 230 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 NNATQ16517 81 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 TRMT12Q53H54 448 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SPINK14Q6IE38 97 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SLC29A4Q7RTT9 530 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF605Q86T29 641 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 FAM9CQ8IZT9 166 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 KIRREL3Q8IZU9 778 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 CISD2Q8N5K1 135 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 TMEM156Q8N614 296 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 KRTCAP2Q8N6L1 136 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 OR52R1Q8NGF1 315 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 NUDT8Q8WV74 236 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 CIDECQ96AQ7 238 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 PPCDCQ96CD2 204 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 RASL10BQ96S79 203 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 OR10A5Q9H207 317 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 REEP4Q9H6H4 257 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 WDR55Q9H6Y2 383 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 MEAF6Q9HAF1 191 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SLCO1B3Q9NPD5 702 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 KLHL1Q9NR64 748 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.52□□□□□ -0.894e-7■■■■■ 44
HDAC6-222ENST00000478095 SH3BP4Q9P0V3 963 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 LRFN1Q9P244 771 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 BCAP29Q9UHQ4 241 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 DTX4Q9Y2E6 619 aa9.52□□□□□ -0.89
HDAC6-222ENST00000478095 WBP11Q9Y2W2 641 aaKnown RBP9.52□□□□□ -0.89
HDAC6-222ENST00000478095 MYO1GB0I1T2 1018 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 SDHDO14521 159 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 SCAMP2O15127 329 aaKnown RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 HDAC3O15379 428 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 PDPK1O15530 556 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 PRAMEF2O60811 474 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 NEURL1O76050 574 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 OR6B1O95007 311 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 CBX7O95931 251 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 S1PR1P21453 382 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 EPHA3P29320 983 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MPIP34949 423 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 HPCAL1P37235 193 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 SOX3P41225 446 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 ASMTP46597 345 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 CYB561P49447 251 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 HLCSP50747 726 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 DIO3P55073 304 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 EMX2Q04743 252 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 SRSF11Q05519 484 aaKnown RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MAP4K2Q12851 820 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 HSPB3Q12988 150 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MAD2L1Q13257 205 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 PDE7AQ13946 482 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 INPP5JQ15735 1006 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 CEBPEQ15744 281 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MPEG1Q2M385 716 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF766Q5HY98 468 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 TMEM107Q6UX40 140 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 IL20RBQ6UXL0 311 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 FAM47EQ6ZV65 393 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MAVSQ7Z434 540 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF227Q86WZ6 799 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 SAMD14Q8IZD0 417 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-222ENST00000478095 CYP4Z2PQ8N1L4 340 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 ARMC10Q8N2F6 343 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF615Q8N8J6 731 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 MDS2Q8NDY4 140 aa9.51□□□□□ -0.89
HDAC6-222ENST00000478095 OR7G2Q8NG99 324 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms