RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NID1P14543 1247 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 CHMP24386 653 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 LOXP28300 417 aaPredicted RBP18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 GALNSP34059 522 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 CD79BP40259 229 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 PCDH1Q08174 1060 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 SLAMF1Q13291 335 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 E2F2Q14209 437 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 TBCCQ15814 346 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 HIST2H2ACQ16777 129 aaPredicted RBP18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 MSS51Q4VC12 460 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 C18orf63Q68DL7 685 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 HIST2H2AA3Q6FI13 130 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 PODNL1Q6PEZ8 512 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 ANGPTL8Q6UXH0 198 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 GPR180Q86V85 440 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 IGDCC3Q8IVU1 814 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 OR1J4Q8NGS1 313 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 TMEM158Q8WZ71 300 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 SORBS1Q9BX66 1292 aaKnown RBP18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 ZNF701Q9NV72 531 aaPredicted RBP18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 WIF1Q9Y5W5 379 aa18.39■□□□□ 0.53
PDLIM1-202ENST00000477757 SH3BGRLO75368 114 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 SOX30O94993 753 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 GPR75O95800 540 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 IFNA2P01563 188 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 EPORP19235 508 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 TLX1P31314 330 aaPredicted RBP18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 SSTR4P31391 388 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 CASP2P42575 452 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 HSPA7P48741 367 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 HNRNPH2P55795 449 aaKnown RBP18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 NRG3P56975 720 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 TAS2R39P59534 338 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 SRYQ05066 204 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 SETDB1Q15047 1291 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 FBXO48Q5FWF7 155 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 KHDRBS2Q5VWX1 349 aaKnown RBP18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 TRMT10BQ6PF06 316 aaKnown RBP18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 PLEKHM3Q6ZWE6 761 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 CTHRC1Q96CG8 243 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 OR2B2Q9GZK3 357 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
PDLIM1-202ENST00000477757 FAM95CA0A1B0GW59 222 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 SAP18O00422 153 aaKnown RBP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 STK16O75716 305 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 SMNDC1O75940 238 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 SERPINB1P30740 379 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 UGT2B10P36537 528 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 BUD31P41223 144 aaPredicted RBP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 IRF8Q02556 426 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 CHIT1Q13231 466 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 CYP1B1Q16678 543 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 HLA-DQA1Q5Y7H0 255 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 OR4C11Q6IEV9 310 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 TMEM81Q6P7N7 255 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 CCDC137Q6PK04 289 aaKnown RBP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 ZC3HC1Q86WB0 502 aaKnown RBP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 GRAMD2AQ8IUY3 354 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 LAS2Q8IYD9 372 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 ZCCHC7Q8N3Z6 543 aaKnown RBP18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 C17orf47Q8NEP4 570 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 UBE2E3Q969T4 207 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 ADIPOR1Q96A54 375 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 CMTM7Q96FZ5 175 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 FAM111AQ96PZ2 611 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 METTL7AQ9H8H3 244 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 PSAT1Q9Y617 370 aa18.37■□□□□ 0.53
PDLIM1-202ENST00000477757 HCRTR2O43614 444 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 TMCC2O75069 709 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 TGFB1P01137 390 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 CRHP06850 196 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 ROS1P08922 2347 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 RHOXF2BP0C7M4 288 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 ABCD3P28288 659 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 GFRA1P56159 465 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 RPS13P62277 151 aaKnown RBP18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 TNK1Q13470 666 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 CDKL4Q5MAI5 379 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 PRR22Q8IZ63 422 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 OR14L1PQ8NHC6 308 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 TMEM171Q8WVE6 324 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 ESAMQ96AP7 390 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 STARD4Q96DR4 205 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 DERL2Q9GZP9 239 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 OR51B5Q9H339 312 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 CXorf56Q9H5V9 222 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 CXorf21Q9HAI6 301 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 POPDC3Q9HBV1 291 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 SERHLQ9NQF3 203 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 DLGAP4Q9Y2H0 992 aa18.36■□□□□ 0.53
PDLIM1-202ENST00000477757 USF3Q68DE3 2245 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 PLOD2O00469 737 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 F12P00748 615 aaPredicted RBP18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 ABCB1P08183 1280 aaPredicted RBP18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 SLC35E2BP0CK96 405 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 SLC35E2P0CK97 266 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 PCNAP12004 261 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 LHX2P50458 406 aa18.35■□□□□ 0.53
PDLIM1-202ENST00000477757 RAP1GDS1P52306 607 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms